RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 C8AP07357 584 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 C1DQ13901 141 aaKnown RBP12.97□□□□□ -0.33
TCOF1-213ENST00000514442 KCNJ8Q15842 424 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 PHKG1Q16816 387 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 LRRC73Q5JTD7 316 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 TAPT1Q6NXT6 567 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 PLEKHG7Q6ZR37 379 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 RGL4Q8IZJ4 473 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 MPP5Q8N3R9 675 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 ZNF486Q96H40 463 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-213ENST00000514442 GPR88Q9GZN0 384 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 ANKHQ9HCJ1 492 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 TEX264Q9Y6I9 313 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 TRPM3Q9HCF6 1732 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-213ENST00000514442 SERPINB7O75635 380 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 PRKAG1P54619 331 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 RPS24P62847 133 aaKnown RBP12.97□□□□□ -0.33
TCOF1-213ENST00000514442 PMS2P3Q13401 168 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 PPP2R2DQ66LE6 453 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 CRYBG2Q8N1P7 616 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 OR8H1Q8NGG4 311 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 CHPT1Q8WUD6 406 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 CYP2S1Q96SQ9 504 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 POLE4Q9NR33 117 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 DYRK3O43781 588 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 AIREO43918 545 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 RECQL5O94762 991 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-213ENST00000514442 SORBS2O94875 1100 aaKnown RBP12.97□□□□□ -0.33
TCOF1-213ENST00000514442 EPN2O95208 641 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 DHRS4L1P0CG22 281 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 PKMP14618 531 aaKnown RBP12.97□□□□□ -0.33
TCOF1-213ENST00000514442 ITPKAP23677 461 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 WDR45BQ5MNZ6 344 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 LYPLAL1Q5VWZ2 237 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 TMEM198Q66K66 360 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 MMAAQ8IVH4 418 aaKnown RBP12.97□□□□□ -0.33
TCOF1-213ENST00000514442 CLIP4Q8N3C7 705 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 SLC47A1Q96FL8 570 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 ADAMTS10Q9H324 1103 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 NMUR1Q9HB89 426 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 CRATP43155 626 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 NCF4Q15080 339 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 PYDC2Q56P42 97 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 PITRM1Q5JRX3 1037 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 INTS11Q5TA45 600 aaKnown RBP12.97□□□□□ -0.33
TCOF1-213ENST00000514442 NCBP2-AS2Q69YL0 99 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 UBE2R2Q712K3 238 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-213ENST00000514442 IGFN1Q86VF2 1251 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 COLGALT2Q8IYK4 626 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 C2orf73Q8N5S3 287 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-213ENST00000514442 CAMKK1Q8N5S9 505 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 METTL25Q8N6Q8 603 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 C16orf70Q9BSU1 422 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 CCSER2Q9H7U1 834 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 DEC1Q9P2X7 70 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 TBC1D30Q9Y2I9 924 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 AP3M1Q9Y2T2 418 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 FAM159BA6NKW6 160 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 PRMT5O14744 637 aaPredicted RBP12.96□□□□□ -0.33
TCOF1-213ENST00000514442 TEX28O15482 410 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 OTCP00480 354 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 GLDCP23378 1020 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 GATMP50440 423 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 CDKL1Q00532 357 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 TSNQ15631 228 aaKnown RBP12.96□□□□□ -0.33
TCOF1-213ENST00000514442 INO80DQ53TQ3 878 aaPredicted RBP12.96□□□□□ -0.33
TCOF1-213ENST00000514442 FSTL4Q6MZW2 842 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 CHSY3Q70JA7 882 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 ZNF438Q7Z4V0 828 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 HIPK1Q86Z02 1210 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 ASF1AQ9Y294 204 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 Q9Y3F1 56 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 TRAF6Q9Y4K3 522 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 HEMK1Q9Y5R4 338 aaPredicted RBP12.96□□□□□ -0.33
TCOF1-213ENST00000514442 ISPDA4D126 451 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 IQCF5A8MTL0 148 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 KPNA5O15131 536 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 INSIG1O15503 277 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 TMCC2O75069 709 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 GOT2P00505 430 aaKnown RBP12.96□□□□□ -0.33
TCOF1-213ENST00000514442 MT-ND1P03886 318 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 CNPP09543 421 aaKnown RBP12.96□□□□□ -0.33
TCOF1-213ENST00000514442 MSL3P1P0C860 447 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 FGF3P11487 239 aaPredicted RBP12.96□□□□□ -0.33
TCOF1-213ENST00000514442 BMXP51813 675 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 NKX2-5P52952 324 aaPredicted RBP12.96□□□□□ -0.33
TCOF1-213ENST00000514442 LIMK2P53671 638 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 ANGPT1Q15389 498 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 FGD3Q5JSP0 725 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 GCNT7Q6ZNI0 430 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 SMG8Q8ND04 991 aaKnown RBP12.96□□□□□ -0.33
TCOF1-213ENST00000514442 BTN2A2Q8WVV5 523 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 ATL1Q8WXF7 558 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 COL26A1Q96A83 441 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 TEKT5Q96M29 485 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 KRT84Q9NSB2 600 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 MFHAS1Q9Y4C4 1052 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 C4AP0C0L4 1744 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 CHRNGP07510 517 aa12.96□□□□□ -0.33
TCOF1-213ENST00000514442 SMIM18P0DKX4 95 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms