RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 OVGP1Q12889 678 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 RPA4Q13156 261 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 SP140Q13342 867 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 BOP1Q14137 746 aaKnown RBP15.71■□□□□ 0.11
NUP54-214ENST00000514307 SETDB1Q15047 1291 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 TGFBIQ15582 683 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 KHDC1Q4VXA5 237 aaKnown RBP15.71■□□□□ 0.11
NUP54-214ENST00000514307 ZNF678Q5SXM1 525 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 SULT1C3Q6IMI6 304 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 NAPRTQ6XQN6 538 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 TRAPPC5Q8IUR0 188 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 CFAP206Q8IYR0 622 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 GJD3Q8N144 294 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 TCAIMQ8N3R3 496 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 FLCNQ8NFG4 579 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 ASB11Q8WXH4 323 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 CCDC97Q96F63 343 aaPredicted RBP15.71■□□□□ 0.11
NUP54-214ENST00000514307 SLC12A9Q9BXP2 914 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 STN1Q9H668 368 aaKnown RBP15.71■□□□□ 0.11
NUP54-214ENST00000514307 PARVBQ9HBI1 364 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 MBNL1Q9NR56 388 aaKnown RBP15.71■□□□□ 0.11
NUP54-214ENST00000514307 USP36Q9P275 1121 aaKnown RBP15.71■□□□□ 0.11
NUP54-214ENST00000514307 STK38LQ9Y2H1 464 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 HS3ST3A1Q9Y663 406 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 SLC5A10A0PJK1 596 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 NEMP2A6NFY4 417 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 CHUKO15111 745 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 SLC31A1O15431 190 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 SEMA4FO95754 770 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 MLYCDO95822 493 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 ANXA5P08758 320 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 MYCLP1P12525 358 aaPredicted RBP15.7■□□□□ 0.1
NUP54-214ENST00000514307 ZNF8P17098 575 aaPredicted RBP15.7■□□□□ 0.1
NUP54-214ENST00000514307 AKT2P31751 481 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 RPIAP49247 311 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 CTSCP53634 463 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 CDKL1Q00532 357 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 IRF4Q15306 451 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 UBE2R2Q712K3 238 aaPredicted RBP15.7■□□□□ 0.1
NUP54-214ENST00000514307 LRRTM4Q86VH4 590 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 AMZ2Q86W34 360 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 SPEM1Q8N4L4 309 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 CAMKK1Q8N5S9 505 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 OR2L2Q8NH16 312 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 KLK6Q92876 244 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 GLMNQ92990 594 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 EXT2Q93063 718 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 IER2Q9BTL4 223 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 APOOQ9BUR5 198 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 C1QTNF3Q9BXJ4 246 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 ZNF395Q9H8N7 513 aaPredicted RBP15.7■□□□□ 0.1
NUP54-214ENST00000514307 PFDN4Q9NQP4 134 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 EBF1Q9UH73 591 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 ZNHIT2Q9UHR6 403 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 DCTN4Q9UJW0 460 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 TMEM98Q9Y2Y6 226 aa15.7■□□□□ 0.1
NUP54-214ENST00000514307 A0A0G2JND7 137 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 H3BM21 787 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 GFYI3L273 518 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 GIPC1O14908 333 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 FFAR2O15552 330 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 GRID2O43424 1007 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 LYPLA1O75608 230 aaPredicted RBP15.69■□□□□ 0.1
NUP54-214ENST00000514307 ACSL1P33121 698 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 RPS9P46781 194 aaKnown RBP15.69■□□□□ 0.1
NUP54-214ENST00000514307 HNMTP50135 292 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 AP1S2P56377 157 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 YPEL5P62699 121 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 ARHGAP8P85298 464 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 FZD5Q13467 585 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 FGL2Q14314 439 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 PCBP2Q15366 365 aaKnown RBP eCLIP15.69■□□□□ 0.1
NUP54-214ENST00000514307 UNC50Q53HI1 259 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 Q6ZS52 159 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 PELI3Q8N2H9 469 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 BEND7Q8N7W2 519 aaPredicted RBP15.69■□□□□ 0.1
NUP54-214ENST00000514307 GBP7Q8N8V2 638 aaPredicted RBP15.69■□□□□ 0.1
NUP54-214ENST00000514307 FAM174AQ8TBP5 190 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 HM13Q8TCT9 377 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 MAGEC3Q8TD91 643 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 ATL1Q8WXF7 558 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 CLDN23Q96B33 292 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 SORT1Q99523 831 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 EGFL8Q99944 293 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 C20orf27Q9GZN8 174 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 WWP1Q9H0M0 922 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 PNPOQ9NVS9 261 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 HAO1Q9UJM8 370 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 DMTF1Q9Y222 760 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 SIT1Q9Y3P8 196 aa15.69■□□□□ 0.1
NUP54-214ENST00000514307 MTF2Q9Y483 593 aaPredicted RBP15.69■□□□□ 0.1
NUP54-214ENST00000514307 CCT8L1PA6NM43 557 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 TRPC5OSA6NMA1 111 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 KIAA0754O94854 1291 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 MATN4O95460 622 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 APBB3O95704 486 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 CATP04040 527 aaKnown RBP15.68■□□□□ 0.1
NUP54-214ENST00000514307 FGF4P08620 206 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 KITP10721 976 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 HNRNPA2B1P22626 353 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms