RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 ARL4AP40617 200 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 RPL26P61254 145 aaKnown RBP10.87□□□□□ -0.67
RNF4-218ENST00000513284 OTUD4Q01804 1114 aaKnown RBP10.87□□□□□ -0.67
RNF4-218ENST00000513284 MLIPQ5VWP3 458 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 TXNRD3NBQ6F5E7 133 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 PLEKHA7Q6IQ23 1121 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 KLHL35Q6PF15 583 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 TMCO3Q6UWJ1 677 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 NXPE1Q8N323 547 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 TRAM1L1Q8N609 369 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 PPP4R1Q8TF05 950 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 LRRN4Q8WUT4 740 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 TM9SF4Q92544 642 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 IP6K3Q96PC2 410 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 CSPG4P5Q96PW8 444 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 NRTNQ99748 197 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 POLR1EQ9GZS1 481 aaKnown RBP10.87□□□□□ -0.67
RNF4-218ENST00000513284 MRPL47Q9HD33 250 aaKnown RBP10.87□□□□□ -0.67
RNF4-218ENST00000513284 ATP13A2Q9NQ11 1180 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 HAUS2Q9NVX0 235 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 RPL26L1Q9UNX3 145 aaKnown RBP10.87□□□□□ -0.67
RNF4-218ENST00000513284 CFAP20Q9Y6A4 193 aaKnown RBP10.87□□□□□ -0.67
RNF4-218ENST00000513284 TMEM150CB9EJG8 249 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 H3BRJ5 948 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 ALOX12BO75342 701 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 POP7O75817 140 aaKnown RBP10.86□□□□□ -0.67
RNF4-218ENST00000513284 WISP2O76076 250 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 MSL3P1P0C860 447 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 MYBL1P10243 752 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 CAPN3P20807 821 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 SERPINB6P35237 376 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 TMEM115Q12893 351 aaPredicted RBP10.86□□□□□ -0.67
RNF4-218ENST00000513284 CDC16Q13042 620 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 GALNT3Q14435 633 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 ZNF169Q14929 603 aaPredicted RBP10.86□□□□□ -0.67
RNF4-218ENST00000513284 ASIC2Q16515 512 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 DPYSL2Q16555 572 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 ZNF569Q5MCW4 686 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 TMTC4Q5T4D3 741 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 TMC3Q7Z5M5 1100 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 ZNF808Q8N4W9 903 aaPredicted RBP10.86□□□□□ -0.67
RNF4-218ENST00000513284 ATPAF2Q8N5M1 289 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 CCHCR1Q8TD31 782 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 TAAR6Q96RI8 345 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 INSM2Q96T92 566 aaPredicted RBP10.86□□□□□ -0.67
RNF4-218ENST00000513284 DHRS4Q9BTZ2 278 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 ZSCAN5AQ9BUG6 496 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 ZFYVE1Q9HBF4 777 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 RBM22Q9NW64 420 aaKnown RBP eCLIP10.86□□□□□ -0.671e-9■■■■■ 27.3
RNF4-218ENST00000513284 PTRH2Q9Y3E5 179 aaKnown RBP10.86□□□□□ -0.67
RNF4-218ENST00000513284 ANKRD12Q6UB98 2062 aa10.86□□□□□ -0.67
RNF4-218ENST00000513284 SMTNL1A8MU46 457 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 TMCO5BA8MYB1 307 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 PEX12O00623 359 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 MATN3O15232 486 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 HCRTR1O43613 425 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 KLHL41O60662 606 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 MBD3O95983 291 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 CTSBP07858 339 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 PIRTP0C851 137 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 GZMAP12544 262 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 ST6GAL1P15907 406 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 POLR2CP19387 275 aaPredicted RBP10.85□□□□□ -0.67
RNF4-218ENST00000513284 CES1P23141 567 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 SSTR2P30874 369 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 HALP42357 657 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 CTSCP53634 463 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 DCDC1P59894 354 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 SRSF11Q05519 484 aaKnown RBP10.85□□□□□ -0.67
RNF4-218ENST00000513284 DMPKQ09013 629 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 NFE2L1Q14494 772 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 VWA2Q5GFL6 755 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 B4GALNT4Q76KP1 1039 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 CDH24Q86UP0 819 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 CARFQ8N187 725 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 RASGEF1AQ8N9B8 481 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 OR2Y1Q8NGV0 311 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 ZNF653Q96CK0 615 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 AGAP3Q96P47 875 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 DPH2Q9BQC3 489 aaPredicted RBP10.85□□□□□ -0.67
RNF4-218ENST00000513284 SYT11Q9BT88 431 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 TMUB1Q9BVT8 246 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 C1GALT1Q9NS00 363 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 SOHLH2Q9NX45 425 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 NFKBIL1Q9UBC1 381 aaPredicted RBP10.85□□□□□ -0.67
RNF4-218ENST00000513284 SLC24A2Q9UI40 661 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 SHOC2Q9UQ13 582 aa10.85□□□□□ -0.67
RNF4-218ENST00000513284 CCL21O00585 134 aa10.84□□□□□ -0.67
RNF4-218ENST00000513284 AURKAO14965 403 aa10.84□□□□□ -0.67
RNF4-218ENST00000513284 KCNN4O15554 427 aa10.84□□□□□ -0.67
RNF4-218ENST00000513284 KLHL18O94889 574 aa10.84□□□□□ -0.67
RNF4-218ENST00000513284 IGHEP01854 428 aa10.84□□□□□ -0.67
RNF4-218ENST00000513284 HLA-DQB2P05538 268 aa10.84□□□□□ -0.67
RNF4-218ENST00000513284 MTHFD1P11586 935 aaKnown RBP10.84□□□□□ -0.67
RNF4-218ENST00000513284 CYP2A7P20853 494 aa10.84□□□□□ -0.67
RNF4-218ENST00000513284 PCK1P35558 622 aa10.84□□□□□ -0.67
RNF4-218ENST00000513284 PREPP48147 710 aa10.84□□□□□ -0.67
RNF4-218ENST00000513284 LMAN1P49257 510 aa10.84□□□□□ -0.67
RNF4-218ENST00000513284 ADORA2A-AS1P86434 159 aa10.84□□□□□ -0.67
RNF4-218ENST00000513284 ADCY2Q08462 1091 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms