RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 ARMC12Q5T9G4 340 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 AGBL4Q5VU57 503 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 ZDHHC20Q5W0Z9 365 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 NEPROQ6NW34 567 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 KYAT3Q6YP21 454 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 GCNT7Q6ZNI0 430 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 Q6ZSR6 202 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 CILP2Q8IUL8 1156 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 CBARPQ8N350 705 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 TTC30BQ8N4P2 665 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 C9orf43Q8TAL5 461 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 RAB3IL1Q8TBN0 382 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 FRS2Q8WU20 508 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 CKAP2Q8WWK9 683 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 USP7Q93009 1102 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 MAGEB18Q96M61 343 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 ZNF317Q96PQ6 595 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 OSBPL1AQ9BXW6 950 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 STRADBQ9C0K7 418 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 PREBQ9HCU5 417 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 PIH1D1Q9NWS0 290 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 NFKBIL1Q9UBC1 381 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 DKK3Q9UBP4 350 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 FBXO5Q9UKT4 447 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 ACSL6Q9UKU0 697 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 PHTF1Q9UMS5 762 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 VPS9D1Q9Y2B5 631 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 FCF1Q9Y324 198 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 PLLPQ9Y342 182 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 PSAT1Q9Y617 370 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 NOTCH2Q04721 2471 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 DOPEY1Q5JWR5 2465 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 BSNQ9UPA5 3926 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 UTP20O75691 2785 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 A0A0J9YYE9 177 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 H3BM21 787 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 NVLO15381 856 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 GLRA3O75311 464 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 FAM107AO95990 144 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 TRBC1P01850 177 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 CREB1P16220 341 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 LPOP22079 712 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 GNLYP22749 145 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 NFKBIAP25963 317 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 DCTP40126 519 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 NNMTP40261 264 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 ETV5P41161 510 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 SUOXP51687 545 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 WDR4P57081 412 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 TAS2R38P59533 333 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 POU4F1Q01851 419 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 GUCY1A3Q02108 690 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 THOC5Q13769 683 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 FZD2Q14332 565 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 PDK4Q16654 411 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 MRNIPQ6NTE8 343 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 BRAT1Q6PJG6 821 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 AFTPHQ6ULP2 937 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 STRA8Q7Z7C7 330 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 SLC35F3Q8IY50 421 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 UNC5BQ8IZJ1 945 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 NDUFAF2Q8N183 169 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 SLC25A41Q8N5S1 370 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 GRIN3AQ8TCU5 1115 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 VPS39Q96JC1 886 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 SELENOSQ9BQE4 189 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 POPDC3Q9HBV1 291 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 PPANQ9NQ55 473 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 INTS10Q9NVR2 710 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 NCKIPSDQ9NZQ3 722 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 IL17CQ9P0M4 197 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 DCDC2Q9UHG0 476 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 KLF15Q9UIH9 416 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 GGT7Q9UJ14 662 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 CHKBQ9Y259 395 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 LOXL2Q9Y4K0 774 aa10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 USP9YO00507 2555 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-217ENST00000512274 ANKRD17O75179 2603 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 FLNCQ14315 2725 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 GMNCA6NCL1 334 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 POM121BA6NF01 834 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 AGAP14A8MT82 685 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 NTN3O00634 580 aaPredicted RBP10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 COPEO14579 308 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 BIRC5O15392 142 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 BNIP3LO60238 219 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 UGT1A9O60656 530 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 SEMA7AO75326 666 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 PCDH8O95206 1070 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 AHSGP02765 367 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 PDHA1P08559 390 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 PYGBP11216 843 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 JUNDP17535 347 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 HNRNPA2B1P22626 353 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 GABRB3P28472 473 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 CRABP2P29373 138 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 CD151P48509 253 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 CD97P48960 835 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 POLR2LP62875 67 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 PRAMEP78395 509 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms