RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 NFATC4Q14934 902 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 FASTKD3Q14CZ7 662 aaKnown RBP9.32□□□□□ -0.92
SNF8-211ENST00000512243 LONRF1Q17RB8 773 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 DUOXA1Q1HG43 343 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 AARS2Q5JTZ9 985 aaKnown RBP9.32□□□□□ -0.92
SNF8-211ENST00000512243 SPANXN3Q5MJ09 141 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 LAYNQ6UX15 382 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 SNX20Q7Z614 316 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 IQCHQ86VS3 1027 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 PELI3Q8N2H9 469 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 GDAP1Q8TB36 358 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 DTX3LQ8TDB6 740 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 PYROXD1Q8WU10 500 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 VPS35Q96QK1 796 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 AGAP2Q99490 1192 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 APOOQ9BUR5 198 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 ASB8Q9H765 288 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 IL26Q9NPH9 171 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 CATSPERZQ9NTU4 200 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 OR1A2Q9Y585 309 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 TEX264Q9Y6I9 313 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 SLCO1B1Q9Y6L6 691 aa9.32□□□□□ -0.92
SNF8-211ENST00000512243 ARHGEF17Q96PE2 2063 aaPredicted RBP9.32□□□□□ -0.92
SNF8-211ENST00000512243 FAM186AA6NE01 2351 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 RIF1Q5UIP0 2472 aaKnown RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 GOLGA4Q13439 2230 aaKnown RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 EP300Q09472 2414 aaPredicted RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 USP34Q70CQ2 3546 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 A0A1W2PR77 199 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 OR51F1A6NGY5 319 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 INPP4BO15327 924 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 GPR39O43194 453 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 VAPBO95292 243 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 LMNAP02545 664 aaKnown RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 RETP07949 1114 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 HOXC4P09017 264 aaPredicted RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 MYCLP1P12525 358 aaPredicted RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 KELP23276 732 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 HTR1BP28222 390 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 ECHS1P30084 290 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 AKT1P31749 480 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 FOXN2P32314 431 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 TRIM23P36406 574 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 PPARGP37231 505 aaPredicted RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 MAGEA4P43358 317 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 THOC5Q13769 683 aaKnown RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 PDE1CQ14123 709 aaPredicted RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 PTK2BQ14289 1009 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 SMAD1Q15797 465 aaKnown RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 ERCC6LQ2NKX8 1250 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 GPR33Q49SQ1 333 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 ATP13A5Q4VNC0 1218 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 FASTKD1Q53R41 847 aaKnown RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 LDLRAP1Q5SW96 308 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 LYPLAL1Q5VWZ2 237 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 STEAP4Q687X5 459 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 KDM7AQ6ZMT4 941 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 MACC1Q6ZN28 852 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 UNC5AQ6ZN44 842 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 Q6ZSR6 202 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 TAS2R42Q7RTR8 314 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 TMEM135Q86UB9 458 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 DCP2Q8IU60 420 aaKnown RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 MCATQ8IVS2 390 aaKnown RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 IGDCC3Q8IVU1 814 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 PALM2Q8IXS6 379 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 GSPT2Q8IYD1 628 aaKnown RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 POU5F2Q8N7G0 328 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 EIF1ADQ8N9N8 165 aaKnown RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 SUMF1Q8NBK3 374 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 OR4L1Q8NH43 312 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 GABPB2Q8TAK5 448 aaPredicted RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 GSDMBQ8TAX9 411 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 ZNF398Q8TD17 642 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 CALML6Q8TD86 181 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 BTN2A2Q8WVV5 523 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 GLYATL1Q969I3 302 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 FUBP1Q96AE4 644 aaKnown RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 HIC2Q96JB3 615 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 BMFQ96LC9 184 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 WDR92Q96MX6 357 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 TTC25Q96NG3 672 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 TTC1Q99614 292 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 WDR83Q9BRX9 315 aaKnown RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 NUSAP1Q9BXS6 441 aaKnown RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 TEX101Q9BY14 249 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 ARRDC1-AS1Q9H2J1 176 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 SUDS3Q9H7L9 328 aaPredicted RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 C20orf96Q9NUD7 363 aaPredicted RBP9.31□□□□□ -0.92
SNF8-211ENST00000512243 SMOXQ9NWM0 555 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 NCDNQ9UBB6 729 aa9.31□□□□□ -0.92
SNF8-211ENST00000512243 ZCWPW2A0A1B0GU75 182 aa9.3□□□□□ -0.92
SNF8-211ENST00000512243 A0A1B0GVT2 93 aa9.3□□□□□ -0.92
SNF8-211ENST00000512243 FAM221AA4D161 298 aa9.3□□□□□ -0.92
SNF8-211ENST00000512243 TLR4O00206 839 aa9.3□□□□□ -0.92
SNF8-211ENST00000512243 VILLO15195 856 aa9.3□□□□□ -0.92
SNF8-211ENST00000512243 PFDN6O15212 129 aa9.3□□□□□ -0.92
SNF8-211ENST00000512243 UGT1A9O60656 530 aa9.3□□□□□ -0.92
SNF8-211ENST00000512243 SPAG6O75602 509 aa9.3□□□□□ -0.92
SNF8-211ENST00000512243 SLC25A14O95258 325 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms