RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 LUZP1Q86V48 1076 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 ZNF295-AS1Q8N0V1 137 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 GPR26Q8NDV2 337 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 GPR150Q8NGU9 434 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 NACC2Q96BF6 587 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 PTERQ96BW5 349 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 AGPAT1Q99943 283 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 XPO4Q9C0E2 1151 aaKnown RBP11.26□□□□□ -0.61
RNF4-216ENST00000511859 NAT10Q9H0A0 1025 aaKnown RBP11.26□□□□□ -0.61
RNF4-216ENST00000511859 CBX8Q9HC52 389 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 NFKBIL1Q9UBC1 381 aaPredicted RBP11.26□□□□□ -0.61
RNF4-216ENST00000511859 TMEM191CA6NGB0 347 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 TMEM150CB9EJG8 249 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 MATN3O15232 486 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 DIAPH2O60879 1101 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 LCA5LO95447 670 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 FOLR3P41439 243 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 PREPP48147 710 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 KPNA2P52292 529 aaKnown RBP11.25□□□□□ -0.61
RNF4-216ENST00000511859 MYL5Q02045 173 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 DMPKQ09013 629 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 GTF2H3Q13889 308 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 TLR1Q15399 786 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 HIF1AQ16665 826 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 ZNF789Q5FWF6 425 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 AGAP7PQ5VUJ5 663 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 MLIPQ5VWP3 458 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 ZNF385CQ66K41 422 aaPredicted RBP11.25□□□□□ -0.61
RNF4-216ENST00000511859 PLEKHA7Q6IQ23 1121 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 TIGD7Q6NT04 549 aaPredicted RBP11.25□□□□□ -0.61
RNF4-216ENST00000511859 RPTNQ6XPR3 784 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 B4GALNT4Q76KP1 1039 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 AMZ2Q86W34 360 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 TRAPPC5Q8IUR0 188 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.25□□□□□ -0.61
RNF4-216ENST00000511859 BCORP1Q8N888 145 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 RNF214Q8ND24 703 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 OR1L3Q8NH93 324 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 ENOX1Q8TC92 643 aaKnown RBP11.25□□□□□ -0.61
RNF4-216ENST00000511859 BRSK1Q8TDC3 778 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 MAML1Q92585 1016 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 FATE1Q969F0 183 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 EID2BQ96D98 161 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 TTC25Q96NG3 672 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 AGAP4Q96P64 663 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 GBP5Q96PP8 586 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 CSPG4P5Q96PW8 444 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 TLR10Q9BXR5 811 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 ADGRE3Q9BY15 652 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 FANCLQ9NW38 375 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 RBM22Q9NW64 420 aaKnown RBP eCLIP11.25□□□□□ -0.611e-9■■■■■ 27.3
RNF4-216ENST00000511859 GPN3Q9UHW5 284 aaPredicted RBP11.25□□□□□ -0.61
RNF4-216ENST00000511859 PTRH2Q9Y3E5 179 aaKnown RBP11.25□□□□□ -0.61
RNF4-216ENST00000511859 CSAG2Q9Y5P2 127 aa11.25□□□□□ -0.61
RNF4-216ENST00000511859 DNMT3AQ9Y6K1 912 aaPredicted RBP11.25□□□□□ -0.61
RNF4-216ENST00000511859 OR6C74A6NCV1 312 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 E7EQ34 232 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 MATN2O00339 956 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 ZNF749O43361 778 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 PRICKLE3O43900 615 aaPredicted RBP11.24□□□□□ -0.61
RNF4-216ENST00000511859 MTX2O75431 263 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 CDH3P22223 829 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 EEF1GP26641 437 aaKnown RBP11.24□□□□□ -0.61
RNF4-216ENST00000511859 PCK1P35558 622 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 PRKAA1Q13131 559 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 IQCB1Q15051 598 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 CYP2A13Q16696 494 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 TCP11X2Q5H9J9 407 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 CT47A1Q5JQC4 288 aaPredicted RBP11.24□□□□□ -0.61
RNF4-216ENST00000511859 ALS2CLQ60I27 953 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 XKRXQ6PP77 449 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 TMC3Q7Z5M5 1100 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 BEND7Q8N7W2 519 aaPredicted RBP11.24□□□□□ -0.61
RNF4-216ENST00000511859 OR2Y1Q8NGV0 311 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 ARRDC2Q8TBH0 407 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 VPS35Q96QK1 796 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 OLAHQ9NV23 265 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 NUP210LQ5VU65 1888 aa11.24□□□□□ -0.61
RNF4-216ENST00000511859 AGPSO00116 658 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 POP7O75817 140 aaKnown RBP11.23□□□□□ -0.61
RNF4-216ENST00000511859 MTHFD1P11586 935 aaKnown RBP11.23□□□□□ -0.61
RNF4-216ENST00000511859 CD1EP15812 388 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 CCNCP24863 283 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 NIPAL4Q0D2K0 466 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 XRCC4Q13426 336 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 ASIC2Q16515 512 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 ZFYVE27Q5T4F4 411 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 ZNF324BQ6AW86 544 aaPredicted RBP11.23□□□□□ -0.61
RNF4-216ENST00000511859 CDH24Q86UP0 819 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 C14orf79Q96F83 325 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 CCDC120Q96HB5 630 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 BPIFA3Q9BQP9 254 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 EPS8L2Q9H6S3 715 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 MAGEE1Q9HCI5 957 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 IMP3Q9NV31 184 aaKnown RBP11.23□□□□□ -0.61
RNF4-216ENST00000511859 PSMD13Q9UNM6 376 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 TTLL3Q9Y4R7 772 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 AP1M2Q9Y6Q5 423 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 FBN3Q75N90 2809 aa11.23□□□□□ -0.61
RNF4-216ENST00000511859 DNHD1Q96M86 4753 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms