RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 PRSS44E7EML9 344 aa18.49■□□□□ 0.55
HMGCS1-206ENST00000511774 CNOT3O75175 753 aaKnown RBP18.49■□□□□ 0.55
HMGCS1-206ENST00000511774 VCLP18206 1134 aa18.49■□□□□ 0.55
HMGCS1-206ENST00000511774 POLR2CP19387 275 aaPredicted RBP18.49■□□□□ 0.55
HMGCS1-206ENST00000511774 CCDC122Q5T0U0 273 aa18.49■□□□□ 0.55
HMGCS1-206ENST00000511774 AMZ2Q86W34 360 aa18.49■□□□□ 0.55
HMGCS1-206ENST00000511774 OOSP2Q86WS3 158 aa18.49■□□□□ 0.55
HMGCS1-206ENST00000511774 RAB43Q86YS6 212 aa18.49■□□□□ 0.55
HMGCS1-206ENST00000511774 PQLC3Q8N755 202 aa18.49■□□□□ 0.55
HMGCS1-206ENST00000511774 GPR63Q9BZJ6 419 aa18.49■□□□□ 0.55
HMGCS1-206ENST00000511774 HSD3B7Q9H2F3 369 aa18.49■□□□□ 0.55
HMGCS1-206ENST00000511774 SLC24A2Q9UI40 661 aa18.49■□□□□ 0.55
HMGCS1-206ENST00000511774 PBLDP30039 288 aaPredicted RBP18.48■□□□□ 0.55
HMGCS1-206ENST00000511774 HIF1AQ16665 826 aa18.48■□□□□ 0.55
HMGCS1-206ENST00000511774 TMTC4Q5T4D3 741 aa18.48■□□□□ 0.55
HMGCS1-206ENST00000511774 CCDC183Q5T5S1 534 aa18.48■□□□□ 0.55
HMGCS1-206ENST00000511774 NIPA2Q8N8Q9 360 aa18.48■□□□□ 0.55
HMGCS1-206ENST00000511774 WWP1Q9H0M0 922 aa18.48■□□□□ 0.55
HMGCS1-206ENST00000511774 POMT2Q9UKY4 750 aa18.48■□□□□ 0.55
HMGCS1-206ENST00000511774 NAV3Q8IVL0 2385 aa18.48■□□□□ 0.55
HMGCS1-206ENST00000511774 LRRC10BA6NIK2 292 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 OR2AG2A6NM03 316 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 LDB2O43679 373 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 UGT1A9O60656 530 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 CCDC172P0C7W6 258 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 CBSLP0DN79 551 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 ST6GAL1P15907 406 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 UGT1A6P19224 532 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 CYP2A7P20853 494 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 UGT1A1P22309 533 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 UGT1A4P22310 534 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 CBSP35520 551 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 LMAN1P49257 510 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 PIGHQ14442 188 aaPredicted RBP18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 NOMO1Q15155 1222 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 PCSK7Q16549 785 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 METRNLQ641Q3 311 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 ZADH2Q8N4Q0 377 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 BEND7Q8N7W2 519 aaPredicted RBP18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 GDAP1Q8TB36 358 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 GRHL3Q8TE85 626 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 TADA1Q96BN2 335 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 IMP4Q96G21 291 aaKnown RBP18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 ISCUQ9H1K1 167 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 NUP62CLQ9H1M0 184 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 UGT1A7Q9HAW7 530 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 UGT1A10Q9HAW8 530 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 UGT1A8Q9HAW9 530 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 IL26Q9NPH9 171 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 RAD18Q9NS91 495 aa18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 NOVA2Q9UNW9 492 aaKnown RBP18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 SNRNP200O75643 2136 aaKnown RBP18.47■□□□□ 0.55
HMGCS1-206ENST00000511774 ZNF749O43361 778 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 ATXN8OSP0DMR3 200 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 PVRP15151 417 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 GTF2H3Q13889 308 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 TMEM220Q6QAJ8 160 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 PPP1R32Q7Z5V6 425 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 FJX1Q86VR8 437 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 CARFQ8N187 725 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 SPATA22Q8NHS9 363 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 HDAC11Q96DB2 347 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 LURAP1Q96LR2 239 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 C12orf66Q96MD2 445 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 KLHL25Q9H0H3 589 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 KIR3DX1Q9H7L2 352 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 MRPL47Q9HD33 250 aaKnown RBP18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 AGPAT4Q9NRZ5 378 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 P4HTMQ9NXG6 502 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 TMEM63CQ9P1W3 806 aa18.46■□□□□ 0.55
HMGCS1-206ENST00000511774 GAPDHSO14556 408 aaPredicted RBP18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 HCRTR1O43613 425 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 KCNJ13O60928 360 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 ALOX12BO75342 701 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 ALPPP05187 535 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 SKILP12757 684 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 CDH3P22223 829 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 GJC1P36383 396 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 PREPP48147 710 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 PER3P56645 1201 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 IFI35P80217 286 aaPredicted RBP18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 XRCC4Q13426 336 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 SSPNQ14714 243 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 ASIC2Q16515 512 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 LILRA3Q8N6C8 439 aaPredicted RBP18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 CLEC1AQ8NC01 280 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 CCNYQ8ND76 341 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 OR4E2Q8NGC2 313 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 FAF2Q96CS3 445 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 RMDN2Q96LZ7 410 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 FANCEQ9HB96 536 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 C1GALT1Q9NS00 363 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 MYO6Q9UM54 1294 aa18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 PTRH2Q9Y3E5 179 aaKnown RBP18.45■□□□□ 0.54
HMGCS1-206ENST00000511774 C9J4A7 227 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 H3BMH7 237 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 MT-CYBP00156 380 aaPredicted RBP18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 CTSBP07858 339 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 UMODP07911 640 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 STSP08842 583 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms