RNA–Protein interactions for RNA: ENST00000511663.5

SH3BP2-220, Transcript of SH3 domain binding protein 2, humanhuman

TSL 5

Gene SH3BP2, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-220ENST00000511663 CYLC1P35663 651 aaPredicted RBP18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 NAP1L1P55209 391 aaKnown RBP18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 PPP1CAP62136 330 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 PTPRCAPQ14761 206 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 C11orf63Q6NUN7 778 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 ZNF449Q6P9G9 518 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 ASB18Q6ZVZ8 466 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 TMEM126BQ8IUX1 230 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 CFAP206Q8IYR0 622 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 CCDC170Q8IYT3 715 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 OR8K5Q8NH50 307 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 HEXDCQ8WVB3 486 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 CALR3Q96L12 384 aaKnown RBP18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 PPP1R2P1Q96PQ5 205 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 CCM2Q9BSQ5 444 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 TRIM5Q9C035 493 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 FANCEQ9HB96 536 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 KCND1Q9NSA2 647 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 SPTA1P02549 2419 aa18.81■□□□□ 0.6
SH3BP2-220ENST00000511663 OR6C74A6NCV1 312 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 FURINP09958 794 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 HADHAP40939 763 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 TUBB4BP68371 445 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 TBX2Q13207 712 aaPredicted RBP18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 TUBB2AQ13885 445 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 UBAP2LQ14157 1087 aaKnown RBP18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 DARS2Q6PI48 645 aaKnown RBP18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 ATCAYQ86WG3 371 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 CDKL3Q8IVW4 592 aaPredicted RBP18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 CARFQ8N187 725 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 D2HGDHQ8N465 521 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 THAP4Q8WY91 577 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 ULK4Q96C45 1275 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 TUBB2BQ9BVA1 445 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 ACTL8Q9H568 366 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 SOHLH2Q9NX45 425 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 SLC24A2Q9UI40 661 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 TLK1Q9UKI8 766 aa18.8■□□□□ 0.6
SH3BP2-220ENST00000511663 GAPDHSO14556 408 aaPredicted RBP18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 CPNE3O75131 537 aaKnown RBP18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 SCRG1O75711 98 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 IPO7O95373 1038 aaKnown RBP18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 TIAF1O95411 115 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 ITGALP20701 1170 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 PTPN4P29074 926 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 CA5AP35218 305 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 MARCKSL1P49006 195 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 PMS2P54278 862 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 ANKRD20A2Q5SQ80 823 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 ANKRD20A1Q5TYW2 823 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 ANKRD20A3Q5VUR7 823 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 RANBP10Q6VN20 620 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 OR4E2Q8NGC2 313 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 MR1Q95460 341 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 LINC00615Q96LM1 132 aaPredicted RBP18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 APOL2Q9BQE5 337 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 KIR3DX1Q9H7L2 352 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 C10orf88Q9H8K7 445 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 FKBPLQ9UIM3 349 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 FARSAQ9Y285 508 aaKnown RBP18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 EFR3BQ9Y2G0 817 aa18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 ZNF106Q9H2Y7 1883 aaKnown RBP18.79■□□□□ 0.6
SH3BP2-220ENST00000511663 MATN2O00339 956 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 KCNN4O15554 427 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 ZNF189O75820 626 aaPredicted RBP18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 LCA5LO95447 670 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 PTMAP06454 111 aaKnown RBP18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 RBP3P10745 1247 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 CDH3P22223 829 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 EIF3EP60228 445 aaKnown RBP18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 TMPRSS15P98073 1019 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 OTUD4Q01804 1114 aaKnown RBP18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 BCL7AQ4VC05 210 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 FAM199XQ6PEV8 388 aaPredicted RBP18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 SYVN1Q86TM6 617 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 TMEM135Q86UB9 458 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 APLFQ8IW19 511 aaPredicted RBP18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 ACTL9Q8TC94 416 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 KRT35Q92764 455 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 FERD3LQ96RJ6 166 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 COPS8Q99627 209 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 VPS37BQ9H9H4 285 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 FEZ2Q9UHY8 353 aaPredicted RBP18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 PCDHA3Q9Y5H8 950 aa18.78■□□□□ 0.6
SH3BP2-220ENST00000511663 IFRD1O00458 451 aaPredicted RBP18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 TJP3O95049 919 aa18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 ATP1B2P14415 290 aaPredicted RBP18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 POLR2CP19387 275 aaPredicted RBP18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 NR1D1P20393 614 aa18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 PSMB4P28070 264 aa18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 GSDMDP57764 484 aa18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 SEMA5AQ13591 1074 aa18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 GPR19Q15760 415 aa18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 DUS1LQ6P1R4 473 aaKnown RBP18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 CERS6Q6ZMG9 384 aa18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 SNX20Q7Z614 316 aa18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 TC2NQ8N9U0 490 aa18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 SPDYE1Q8NFV5 336 aaPredicted RBP18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 HM13Q8TCT9 377 aa18.77■□□□□ 0.6
SH3BP2-220ENST00000511663 LCN9Q8WX39 176 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms