RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TMEM214Q6NUQ4 689 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 LRRC8BQ6P9F7 803 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 LVRNQ6Q4G3 990 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 UNQ6494/PRO21346Q6UXR6 183 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 PPP1R21Q6ZMI0 780 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 SNX20Q7Z614 316 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 LRRTM4Q86VH4 590 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 GKN2Q86XP6 184 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 TRAPPC5Q8IUR0 188 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 CCNJLQ8IV13 435 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 KLHL7Q8IXQ5 586 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 ATL2Q8NHH9 583 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 STYXQ8WUJ0 223 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 MAIP1Q8WWC4 291 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 HDAC10Q969S8 669 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 MFSD3Q96ES6 412 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 SGF29Q96ES7 293 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 C16orf45Q96MC5 204 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 DUSP23Q9BVJ7 150 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 KIFC1Q9BW19 673 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 TBC1D10AQ9BXI6 508 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 GSDMCQ9BYG8 508 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 FOXP3Q9BZS1 431 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 C12orf49Q9H741 205 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 ASB8Q9H765 288 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 KLC4Q9NSK0 619 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 CUEDC1Q9NWM3 386 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 KCTD5Q9NXV2 234 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 PCYOX1Q9UHG3 505 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 FEZ2Q9UHY8 353 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 APPL1Q9UKG1 709 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 RIMKLBQ9ULI2 386 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 SOX13Q9UN79 622 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 APOBEC2Q9Y235 224 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 MED16Q9Y2X0 877 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 PKP3Q9Y446 797 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 KCNMB2Q9Y691 235 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 SLC30A1Q9Y6M5 507 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 ATMQ13315 3056 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 MGAQ8IWI9 3026 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 PIKFYVEQ9Y2I7 2098 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 IGHV1OR21-1A0A087WYE8 117 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 C2orf81A6NN90 581 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 IQCF5A8MTL0 148 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 RAD51CO43502 376 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 VEGFDO43915 354 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 SNX2O60749 519 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 CSO75390 466 aaKnown RBP7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 CDK14O94921 469 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 TRIM16O95361 564 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 CRTAMO95727 393 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 C1QAP02745 245 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 TPBGLP0DKB5 382 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 F3P13726 295 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 HGFP14210 728 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 ITGALP20701 1170 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 RPL10P27635 214 aaKnown RBP7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 GRNP28799 593 aaKnown RBP7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 CD1CP29017 333 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 ETV5P41161 510 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 RPL21P46778 160 aaKnown RBP7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 FASLGP48023 281 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 PREPP48147 710 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 ST13P50502 369 aaKnown RBP7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 GFERP55789 205 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 CACNG1Q06432 222 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 LRP8Q14114 963 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 C16orf72Q14CZ0 275 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 ISXQ2M1V0 245 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 TYSND1Q2T9J0 566 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 IYDQ6PHW0 289 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 TMEM220Q6QAJ8 160 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 AFTPHQ6ULP2 937 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 PACS1Q6VY07 963 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 PRICKLE2Q7Z3G6 844 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 ZNF572Q7Z3I7 529 aaPredicted RBP7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 VRK3Q8IV63 474 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 Q8N9G6 341 aaPredicted RBP7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 LMNTD1Q8N9Z9 388 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 MCUQ8NE86 351 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 GIMAP7Q8NHV1 300 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 MAPK15Q8TD08 544 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 RSC1A1Q92681 617 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 ATXN7L3BQ96GX2 97 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 SIGLEC10Q96LC7 697 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 LINC00615Q96LM1 132 aaPredicted RBP7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 PPP1R2P1Q96PQ5 205 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 SRPK1Q96SB4 655 aaKnown RBP7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 SLC30A3Q99726 388 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 C19orf43Q9BQ61 176 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 TWSG1Q9GZX9 223 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 P2RY12Q9H244 342 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 OR52A5Q9H2C5 316 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 SEMA6CQ9H3T2 930 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 DPEP2Q9H4A9 486 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 RMI1Q9H9A7 625 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 COG4Q9H9E3 785 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 RDH14Q9HBH5 336 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 MRM3Q9HC36 420 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms