RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 OR8J1Q8NGP2 316 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 FAM110DQ8TAY7 271 aaPredicted RBP4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 CKAP2Q8WWK9 683 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 SCAMP4Q969E2 229 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 ST6GALNAC6Q969X2 333 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 DHTKD1Q96HY7 919 aaPredicted RBP4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 IFT74Q96LB3 600 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC46A1Q96NT5 459 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 QRFPRQ96P65 431 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 KLHL5Q96PQ7 755 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 ASCL2Q99929 193 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 EGFL8Q99944 293 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 JPH2Q9BR39 696 aaPredicted RBP4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 MMTAG2Q9BU76 263 aaKnown RBP4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 MRI1Q9BV20 369 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 CDK19Q9BWU1 502 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 TTYH3Q9C0H2 523 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 VCX2Q9H322 139 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 FZD8Q9H461 694 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 C8orf33Q9H7E9 229 aaPredicted RBP4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 GPN1Q9HCN4 374 aaPredicted RBP4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 PAG1Q9NWQ8 432 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 DLGAP2Q9P1A6 1054 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 KCNN3Q9UGI6 736 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 CHRNA9Q9UGM1 479 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 HAO1Q9UJM8 370 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 KCNK6Q9Y257 313 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 WBP11Q9Y2W2 641 aaKnown RBP4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 CMAHPQ9Y471 501 aa4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 COPG1Q9Y678 874 aaKnown RBP4.25□□□□□ -1.73
SMARCA5-202ENST00000508573 MYO3BQ8WXR4 1341 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 C15orf38-AP3S2A0A0A6YYH1 394 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 A0A1W2PN81 502 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 A0A1W2PPM1 405 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 LNP1A1A4G5 178 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 YDJCA8MPS7 323 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 TLR4O00206 839 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 HS3ST1O14792 307 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 NKX2-8O15522 239 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 TEX33O43247 280 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 CIDEAO60543 219 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 VPS4BO75351 444 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 PROP1O75360 226 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 MFN2O95140 757 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 CYP3A4P08684 503 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 IQCF3P0C7M6 154 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 UBTFL6P0CB48 400 aaPredicted RBP4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 EPB41P11171 864 aaKnown RBP4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 TCF4P15884 667 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 CYP2F1P24903 491 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 FMO4P31512 558 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 CHRNA7P36544 502 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 PTPN9P43378 593 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 PCP4P48539 62 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 NDUFV1P49821 464 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 ARSEP51690 589 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 OAZ1P54368 228 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 MFAP3P55082 362 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 CDH13P55290 713 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 ITIH3Q06033 890 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 CXCL9Q07325 125 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 ACSM1Q08AH1 577 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 MTAPQ13126 283 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 PDE7AQ13946 482 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 VEPH1Q14D04 833 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 IQCB1Q15051 598 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 ACOX1Q15067 660 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC18A3Q16572 532 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 UGP2Q16851 508 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 MGAT5BQ3V5L5 792 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 USH1GQ495M9 461 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 IFI44LQ53G44 452 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 TMEM88Q6PEY1 159 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 CLEC9AQ6UXN8 241 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 PRSS42Q7Z5A4 293 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 ADIPOR2Q86V24 386 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 RASAL3Q86YV0 1011 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 FAM219AQ8IW50 185 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 MFN1Q8IWA4 741 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 TIGD4Q8IY51 512 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 KRT222Q8N1A0 295 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC43A2Q8N370 569 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC17A8Q8NDX2 589 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 NSMCE1Q8WV22 266 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 SELENOMQ8WWX9 145 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 NPIPB3Q92617 1050 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 APBB2Q92870 758 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 FUBP1Q96AE4 644 aaKnown RBP4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 LRRC39Q96DD0 335 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 SNRNP40Q96DI7 357 aaKnown RBP4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 C16orf58Q96GQ5 468 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 ARL5BQ96KC2 179 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 ZNF778Q96MU6 729 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 NAP1L3Q99457 506 aaPredicted RBP4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 EIF3CQ99613 913 aaKnown RBP4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 NPAS1Q99742 590 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 SSX3Q99909 188 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 SH3GL1Q99961 368 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms