RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 SLX1AQ9BQ83 275 aa8.9□□□□□ -0.98
CAST-220ENST00000508117 NUP85Q9BW27 656 aa8.9□□□□□ -0.98
CAST-220ENST00000508117 SPATA16Q9BXB7 569 aa8.9□□□□□ -0.98
CAST-220ENST00000508117 FANCEQ9HB96 536 aa8.9□□□□□ -0.98
CAST-220ENST00000508117 PCDH9Q9HC56 1237 aa8.9□□□□□ -0.98
CAST-220ENST00000508117 ETNK2Q9NVF9 386 aa8.9□□□□□ -0.98
CAST-220ENST00000508117 NOVA2Q9UNW9 492 aaKnown RBP8.9□□□□□ -0.98
CAST-220ENST00000508117 AKAP9Q99996 3911 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 TMEM191CA6NGB0 347 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 PEX12O00623 359 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 SIAH2O43255 324 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 CDK14O94921 469 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 HBQ1P09105 142 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 BPIP17213 487 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 AMPD1P23109 780 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 ARCN1P48444 511 aaKnown RBP8.89□□□□□ -0.99
CAST-220ENST00000508117 DSC2Q02487 901 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 ITKQ08881 620 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 RPE65Q16518 533 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 QPCTQ16769 361 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 ZNF630Q2M218 657 aaPredicted RBP8.89□□□□□ -0.99
CAST-220ENST00000508117 PLA2G4EQ3MJ16 856 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 ANO6Q4KMQ2 910 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 BOLA3Q53S33 107 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 ZNF789Q5FWF6 425 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 TCP11X2Q5H9J9 407 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 ZFYVE27Q5T4F4 411 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 ZNF648Q5T619 568 aaPredicted RBP8.89□□□□□ -0.99
CAST-220ENST00000508117 LCE2AQ5TA79 106 aaPredicted RBP8.89□□□□□ -0.99
CAST-220ENST00000508117 PRAMEF17Q5VTA0 474 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 FAM69BQ5VUD6 431 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 ZNF385CQ66K41 422 aaPredicted RBP8.89□□□□□ -0.99
CAST-220ENST00000508117 HGSNATQ68CP4 663 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 DESI1Q6ICB0 168 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 TIGD7Q6NT04 549 aaPredicted RBP8.89□□□□□ -0.99
CAST-220ENST00000508117 FJX1Q86VR8 437 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 OOSP2Q86WS3 158 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 GPR26Q8NDV2 337 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 LPCAT1Q8NF37 534 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 GPR150Q8NGU9 434 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 BRSK1Q8TDC3 778 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 GRHL3Q8TE85 626 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 ITLN2Q8WWU7 325 aaPredicted RBP8.89□□□□□ -0.99
CAST-220ENST00000508117 CSPG4P5Q96PW8 444 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 VPS35Q96QK1 796 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 TRIM8Q9BZR9 551 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 ACTR5Q9H9F9 607 aaPredicted RBP8.89□□□□□ -0.99
CAST-220ENST00000508117 ZFYVE1Q9HBF4 777 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 ARFGAP3Q9NP61 516 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 NLRC4Q9NPP4 1024 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 HRASLS2Q9NWW9 162 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 DTLQ9NZJ0 730 aa8.89□□□□□ -0.99
CAST-220ENST00000508117 NIPBLQ6KC79 2804 aaeCLIP8.88□□□□□ -0.99
CAST-220ENST00000508117 ANKHD1Q8IWZ3 2542 aaKnown RBP8.88□□□□□ -0.99
CAST-220ENST00000508117 MATN2O00339 956 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 EPHB6O15197 1021 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 MATN3O15232 486 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 AGXTP21549 392 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 SSTR2P30874 369 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 OTX2P32243 289 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 ZNF165P49910 485 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 KPNA2P52292 529 aaKnown RBP8.88□□□□□ -0.99
CAST-220ENST00000508117 OTUD4Q01804 1114 aaKnown RBP8.88□□□□□ -0.99
CAST-220ENST00000508117 AIMP2Q13155 320 aaKnown RBP8.88□□□□□ -0.99
CAST-220ENST00000508117 RPUSD3Q6P087 351 aaKnown RBP8.88□□□□□ -0.99
CAST-220ENST00000508117 TMC3Q7Z5M5 1100 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 ZNF808Q8N4W9 903 aaPredicted RBP8.88□□□□□ -0.99
CAST-220ENST00000508117 DTX3LQ8TDB6 740 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 TRAPPC9Q96Q05 1148 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 ADGRE3Q9BY15 652 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 ZBTB20Q9HC78 741 aaPredicted RBP8.88□□□□□ -0.99
CAST-220ENST00000508117 C1GALT1Q9NS00 363 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 SEPT11Q9NVA2 429 aaKnown RBP8.88□□□□□ -0.99
CAST-220ENST00000508117 P4HTMQ9NXG6 502 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 SERTAD3Q9UJW9 196 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 ITGB1BP2Q9UKP3 347 aa8.88□□□□□ -0.99
CAST-220ENST00000508117 DNMT3AQ9Y6K1 912 aaPredicted RBP8.88□□□□□ -0.99
CAST-220ENST00000508117 SLC9B1P1A6NJY1 282 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 TMEM150CB9EJG8 249 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 MTHFD1P11586 935 aaKnown RBP8.87□□□□□ -0.99
CAST-220ENST00000508117 COX6B1P14854 86 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 CYP2A7P20853 494 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 PTMSP20962 102 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 CCNCP24863 283 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 HTR1EP28566 365 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 KLK7P49862 253 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 NIPAL4Q0D2K0 466 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 GALNT2Q10471 571 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 TMEM115Q12893 351 aaPredicted RBP8.87□□□□□ -0.99
CAST-220ENST00000508117 TLR1Q15399 786 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 PTCHD3Q3KNS1 767 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 KHDC1Q4VXA5 237 aaKnown RBP8.87□□□□□ -0.99
CAST-220ENST00000508117 HSP90AA4PQ58FG1 418 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 ALS2CLQ60I27 953 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 ZNF324BQ6AW86 544 aaPredicted RBP8.87□□□□□ -0.99
CAST-220ENST00000508117 ARMC6Q6NXE6 501 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 MTFR2Q6P444 385 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 RPTNQ6XPR3 784 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 AMZ2Q86W34 360 aa8.87□□□□□ -0.99
CAST-220ENST00000508117 TRAPPC5Q8IUR0 188 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms