RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 SLC5A10A0PJK1 596 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 A6NCN8 305 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 TRIM38O00635 465 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 LIN7AO14910 233 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 FLRT2O43155 660 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 SNX2O60749 519 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 IDSP22304 550 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 HSD17B3P37058 310 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 TIAL1Q01085 375 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 KLHL38Q2WGJ6 581 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 MAP9Q49MG5 647 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 C6orf132Q5T0Z8 1188 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 GRTP1Q5TC63 336 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 AGAP9Q5VTM2 703 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 NAPRTQ6XQN6 538 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 SFTPA2Q8IWL1 248 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 MREGQ8N565 214 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 EID2Q8N6I1 236 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 GPATCH11Q8N954 259 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 ACVR1CQ8NER5 493 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 SLC44A1Q8WWI5 657 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 KCNJ9Q92806 393 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 FAM136AQ96C01 138 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 MRRFQ96E11 262 aaKnown RBP13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 VPS39Q96JC1 886 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 PRDM8Q9NQV8 689 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 LATS2Q9NRM7 1088 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 PCOLCE2Q9UKZ9 415 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 ACSL5Q9ULC5 683 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 RP1P56715 2156 aa13.2□□□□□ -0.3
UBE2D3-221ENST00000507845 ANKRD12Q6UB98 2062 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 ASXL3Q9C0F0 2248 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 EXOC1LA0A1B0GW35 172 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 FAM95CA0A1B0GW59 222 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 B4DGG1 531 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 E5RI56 91 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 SIGLEC6O43699 453 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 GPC4O75487 556 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 ALPPL2P10696 532 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 BRAFP15056 766 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 CHRM3P20309 590 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 CD9P21926 228 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 RPL10P27635 214 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 PLA2G5P39877 138 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 GRK6P43250 576 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 PREPP48147 710 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 CLCN7P51798 805 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 LIMK2P53671 638 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 CDKN2DP55273 166 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 ILF2Q12905 390 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 RPA4Q13156 261 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 BOP1Q14137 746 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 BRD3Q15059 726 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 SEPT7Q16181 437 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 INAVAQ3KP66 663 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 SYTL3Q4VX76 610 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 HECTD2Q5U5R9 776 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 FAM45BPQ6NSW5 357 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 OGFOD3Q6PK18 319 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 ABRAXAS1Q6UWZ7 409 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 WASH2PQ6VEQ5 465 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 NAXDQ8IW45 347 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 GIMAP7Q8NHV1 300 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 FAM45AQ8TCE6 357 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 ZDHHC1Q8WTX9 485 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 FAM122AQ96E09 287 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 ELMO2Q96JJ3 720 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 PAFAH2Q99487 392 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 GPR21Q99679 349 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 GPR22Q99680 433 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 SLC30A3Q99726 388 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 DUSP23Q9BVJ7 150 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 DPEP2Q9H4A9 486 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 SARS2Q9NP81 518 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 WASH6PQ9NQA3 447 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 SIRPGQ9P1W8 387 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 KLHL42Q9P2K6 505 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 CDYLQ9Y232 598 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 WDR37Q9Y2I8 494 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 MTO1Q9Y2Z2 717 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 VWA7Q9Y334 891 aa13.19□□□□□ -0.3
UBE2D3-221ENST00000507845 CCDC151A5D8V7 595 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 PDZK1P1A8MUH7 402 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 POC1B-GALNT4F8VUJ3 575 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 KPNA5O15131 536 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 SH3BP5O60239 455 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 NOBOXO60393 691 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 VPS26AO75436 327 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 SLCO2B1O94956 709 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 SHBGP04278 402 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 APOA4P06727 396 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 F3P13726 295 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 FDXRP22570 491 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 GCAP28676 217 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 PDHA2P29803 388 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 SPRP35270 261 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 PLOD1Q02809 727 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 HSPA14Q0VDF9 509 aa13.18□□□□□ -0.3
UBE2D3-221ENST00000507845 GBX1Q14549 363 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms