RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 ARMC6Q6NXE6 501 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 FBXO38Q6PIJ6 1188 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 RANBP10Q6VN20 620 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 DAAM2Q86T65 1068 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 BPHLQ86WA6 291 aaPredicted RBP11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 CDKL3Q8IVW4 592 aaPredicted RBP11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 D2HGDHQ8N465 521 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 LILRA3Q8N6C8 439 aaPredicted RBP11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 OR13C4Q8NGS5 318 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 OR2L2Q8NH16 312 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 ACTL9Q8TC94 416 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 RMDN2Q96LZ7 410 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 FAM118BQ9BPY3 351 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 ACTL8Q9H568 366 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 KIR3DX1Q9H7L2 352 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 AKIRIN1Q9H9L7 192 aaPredicted RBP11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 CRLS1Q9UJA2 301 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 ACSL5Q9ULC5 683 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 MAN2B2Q9Y2E5 1009 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 DOPEY2Q9Y3R5 2298 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 HECTD1Q9ULT8 2610 aa11.26□□□□□ -0.61
HMGCS1-204ENST00000507293 PTPN13Q12923 2485 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 KLHL33A6NCF5 533 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 C5orf60A6NFR6 353 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 KCNN4O15554 427 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 PJA2O43164 708 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 SGTAO43765 313 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 SCRG1O75711 98 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 POLBP06746 335 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 CTNNA1P35221 906 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 KPNA2P52292 529 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 ZNF140P52738 457 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 EIF3EP60228 445 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 COPS2P61201 443 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 RPS18P62269 152 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 HSD11B2P80365 405 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 TMPRSS15P98073 1019 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 XIAPP98170 497 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 PRPSAP1Q14558 356 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 GSE1Q14687 1217 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 ANKRD20A2Q5SQ80 823 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 ANKRD20A1Q5TYW2 823 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 ANKRD20A3Q5VUR7 823 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 TCTN3Q6NUS6 607 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 FAM199XQ6PEV8 388 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 ASB18Q6ZVZ8 466 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 TMEM126BQ8IUX1 230 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 ZFPM2Q8WW38 1151 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 DCUN1D1Q96GG9 259 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 LINC00615Q96LM1 132 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 PPM1MQ96MI6 270 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 FERMT1Q9BQL6 677 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 OSBPL8Q9BZF1 889 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 SOHLH2Q9NX45 425 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 TLK1Q9UKI8 766 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 PLAAQ9Y263 795 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 AAR2Q9Y312 384 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 BSNQ9UPA5 3926 aa11.25□□□□□ -0.61
HMGCS1-204ENST00000507293 RCCD1A6NED2 376 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 AGAP14A8MT82 685 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 CCL22O00626 93 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 DDX3YO15523 660 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 CPNE3O75131 537 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 DNAJB5O75953 348 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 STK10O94804 968 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 ZBTB11O95625 1053 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 CRTAMO95727 393 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 RECKO95980 971 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 PDGFAP04085 211 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 RBP3P10745 1247 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 RALBP11234 206 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 POLR2CP19387 275 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 ITGALP20701 1170 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 CTNNA2P26232 953 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 NDUFS1P28331 727 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 PTPN4P29074 926 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 CYLC1P35663 651 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 PRLHRP49683 370 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 TUBB4BP68371 445 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 PDE1BQ01064 536 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 GPS2Q13227 327 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 MSLNQ13421 630 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 SEMA5AQ13591 1074 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 TUBB2AQ13885 445 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 SPARCL1Q14515 664 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 KRT33BQ14525 404 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 UGT8Q16880 541 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 TMTC4Q5T4D3 741 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 CAPRIN2Q6IMN6 1127 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 AADACL2Q6P093 401 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 DARS2Q6PI48 645 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 SARM1Q6SZW1 724 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 MICALCLQ6ZW33 695 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 APLFQ8IW19 511 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 CFAP206Q8IYR0 622 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 CCDC170Q8IYT3 715 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 NXPE1Q8N323 547 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 TEX19Q8NA77 164 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 CCDC110Q8TBZ0 833 aa11.24□□□□□ -0.61
HMGCS1-204ENST00000507293 HM13Q8TCT9 377 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms