RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 RAB11FIP2Q7L804 512 aa18.91■□□□□ 0.62
LMNA-221ENST00000506981 MAATS1Q7Z4T9 603 aa18.91■□□□□ 0.62
LMNA-221ENST00000506981 SLITRK4Q8IW52 837 aa18.91■□□□□ 0.62
LMNA-221ENST00000506981 TMEM159Q96B96 161 aa18.91■□□□□ 0.62
LMNA-221ENST00000506981 CMKLR1Q99788 373 aa18.91■□□□□ 0.62
LMNA-221ENST00000506981 TRIM31Q9BZY9 425 aa18.91■□□□□ 0.62
LMNA-221ENST00000506981 SLC40A1Q9NP59 571 aa18.91■□□□□ 0.62
LMNA-221ENST00000506981 MARCH4Q9P2E8 410 aaPredicted RBP18.91■□□□□ 0.62
LMNA-221ENST00000506981 GNPTGQ9UJJ9 305 aa18.91■□□□□ 0.62
LMNA-221ENST00000506981 CFAP20Q9Y6A4 193 aaKnown RBP18.91■□□□□ 0.62
LMNA-221ENST00000506981 COLEC10Q9Y6Z7 277 aa18.91■□□□□ 0.62
LMNA-221ENST00000506981 UBA6A0AVT1 1052 aaPredicted RBP18.9■□□□□ 0.62
LMNA-221ENST00000506981 PRMT5O14744 637 aaPredicted RBP18.9■□□□□ 0.62
LMNA-221ENST00000506981 BRINP1O60477 761 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 USP1O94782 785 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 UBXN7O94888 489 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 NDUFS1P28331 727 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 LIMK2P53671 638 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 PLOD1Q02809 727 aaPredicted RBP18.9■□□□□ 0.62
LMNA-221ENST00000506981 TRA2AQ13595 282 aaKnown RBP eCLIP18.9■□□□□ 0.62
LMNA-221ENST00000506981 THOC5Q13769 683 aaKnown RBP18.9■□□□□ 0.62
LMNA-221ENST00000506981 BOP1Q14137 746 aaKnown RBP18.9■□□□□ 0.62
LMNA-221ENST00000506981 PTRHD1Q6GMV3 140 aaKnown RBP18.9■□□□□ 0.62
LMNA-221ENST00000506981 WDR74Q6RFH5 385 aaPredicted RBP18.9■□□□□ 0.62
LMNA-221ENST00000506981 TMPRSS9Q7Z410 1059 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 LDB1Q86U70 411 aaPredicted RBP18.9■□□□□ 0.62
LMNA-221ENST00000506981 LRRC6Q86X45 466 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 PDIK1LQ8N165 341 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 FBXO39Q8N4B4 442 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 LILRA3Q8N6C8 439 aaPredicted RBP18.9■□□□□ 0.62
LMNA-221ENST00000506981 GPR150Q8NGU9 434 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 ZNF592Q92610 1267 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 CCDC74BQ96LY2 380 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 RMDN2Q96LZ7 410 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 INSM2Q96T92 566 aaPredicted RBP18.9■□□□□ 0.62
LMNA-221ENST00000506981 SEMA6CQ9H3T2 930 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 VPS9D1Q9Y2B5 631 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 LOXL2Q9Y4K0 774 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 PCDHGA8Q9Y5G5 932 aa18.9■□□□□ 0.62
LMNA-221ENST00000506981 IGHV5-10-1A0A0J9YXX1 117 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 FAM187AA6NFU0 413 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 GOLGA8KD6RF30 607 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 GOLGA8TH3BQL2 631 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 KIF2AO00139 706 aaPredicted RBP18.89■□□□□ 0.61
LMNA-221ENST00000506981 PLD2O14939 933 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 TUBB4AP04350 444 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 JMJD7P0C870 316 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 OGNP20774 298 aaKnown RBP18.89■□□□□ 0.61
LMNA-221ENST00000506981 IVDP26440 423 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 ARNTP27540 789 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 MLLT3P42568 568 aaPredicted RBP18.89■□□□□ 0.61
LMNA-221ENST00000506981 PREPP48147 710 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 TMED2Q15363 201 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 BBS9Q3SYG4 887 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 DUS1LQ6P1R4 473 aaKnown RBP18.89■□□□□ 0.61
LMNA-221ENST00000506981 KLHL35Q6PF15 583 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 PLXDC1Q8IUK5 500 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 BBOF1Q8ND07 529 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 SPDYE1Q8NFV5 336 aaPredicted RBP18.89■□□□□ 0.61
LMNA-221ENST00000506981 GABPB2Q8TAK5 448 aaPredicted RBP18.89■□□□□ 0.61
LMNA-221ENST00000506981 SIGLEC10Q96LC7 697 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 PANX3Q96QZ0 392 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 TCF12Q99081 682 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 NAT9Q9BTE0 207 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 THSD1Q9NS62 852 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 ZMIZ1Q9ULJ6 1067 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 APC2O95996 2303 aa18.89■□□□□ 0.61
LMNA-221ENST00000506981 AGRPO00253 132 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 HGSO14964 777 aaPredicted RBP18.88■□□□□ 0.61
LMNA-221ENST00000506981 URI1O94763 535 aaPredicted RBP18.88■□□□□ 0.61
LMNA-221ENST00000506981 SEC31AO94979 1220 aaKnown RBP18.88■□□□□ 0.61
LMNA-221ENST00000506981 THRAP10827 490 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 HOXB3P14651 431 aaPredicted RBP18.88■□□□□ 0.61
LMNA-221ENST00000506981 TYRP1P17643 537 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 ITGB6P18564 788 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 PGAM1P18669 254 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 CD151P48509 253 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 ITGA8P53708 1063 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 EIF3BP55884 814 aaKnown RBP18.88■□□□□ 0.61
LMNA-221ENST00000506981 DHX9Q08211 1270 aaKnown RBP18.88■□□□□ 0.61
LMNA-221ENST00000506981 BRD3Q15059 726 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 LONRF1Q17RB8 773 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 SNAP47Q5SQN1 464 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 CAPRIN2Q6IMN6 1127 aaKnown RBP18.88■□□□□ 0.61
LMNA-221ENST00000506981 HIBCHQ6NVY1 386 aaPredicted RBP18.88■□□□□ 0.61
LMNA-221ENST00000506981 NEPROQ6NW34 567 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 ZNF574Q6ZN55 896 aaPredicted RBP18.88■□□□□ 0.61
LMNA-221ENST00000506981 TMEM135Q86UB9 458 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 PROSER1Q86XN7 944 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.88■□□□□ 0.61
LMNA-221ENST00000506981 CALML6Q8TD86 181 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 ZFPM2Q8WW38 1151 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 FERD3LQ96RJ6 166 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 TRIM56Q9BRZ2 755 aaKnown RBP18.88■□□□□ 0.61
LMNA-221ENST00000506981 CARD6Q9BX69 1037 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 OR52A5Q9H2C5 316 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 CDC23Q9UJX2 597 aa18.88■□□□□ 0.61
LMNA-221ENST00000506981 PRAMEF33A0A0G2JMD5 474 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 DXOO77932 396 aaKnown RBP18.87■□□□□ 0.61
LMNA-221ENST00000506981 TTC4O95801 387 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms