RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 STX16O14662 325 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 GSTA4O15217 222 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 MATN3O15232 486 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 KPNA6O60684 536 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 CD4P01730 458 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 CD36P16671 472 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 PRKCAP17252 672 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 TSPAN8P19075 237 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 M6PRP20645 277 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 EFNA1P20827 205 aaPredicted RBP15.67■□□□□ 0.1
SCLT1-208ENST00000506368 DCTP40126 519 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 PPP3CCP48454 512 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 CLCN3P51790 818 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 PITX1P78337 314 aaPredicted RBP15.67■□□□□ 0.1
SCLT1-208ENST00000506368 MRPS15P82914 257 aaKnown RBP15.67■□□□□ 0.1
SCLT1-208ENST00000506368 BNC1Q01954 994 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 ZFP69Q49AA0 526 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 TPRG1LQ5T0D9 272 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 SYPL2Q5VXT5 272 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 PM20D1Q6GTS8 502 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 ZNF280DQ6N043 979 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 ATPAF2Q8N5M1 289 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 OR2T12Q8NG77 320 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 SUN5Q8TC36 379 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 DEPDC7Q96QD5 511 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 ARPC5LQ9BPX5 153 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 SMOC2Q9H3U7 446 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 WBP1LQ9NX94 342 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 ERVK-18Q9QC07 812 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 CDH9Q9ULB4 789 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 OR2A25A4D2G3 310 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 CD3EAPO15446 510 aaKnown RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 C22orf31O95567 290 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 HTR3AP46098 478 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 FOXA1P55317 472 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 UFM1P61960 85 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 ATP6AP1LQ52LC2 224 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 FBXO47Q5MNV8 452 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 C17orf99Q6UX52 265 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 LRRC8DQ7L1W4 858 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 B3GNT8Q7Z7M8 397 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 IQCF2Q8IXL9 164 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 Q8N9G6 341 aaPredicted RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 SPATA22Q8NHS9 363 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 PTERQ96BW5 349 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 SYTL2Q9HCH5 934 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 HEBP1Q9NRV9 189 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 CAB39Q9Y376 341 aaPredicted RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 MAGED1Q9Y5V3 778 aaPredicted RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 NOBOXO60393 691 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 KERAO60938 352 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 RECQL5O94762 991 aaPredicted RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 RPS17P08708 135 aaKnown RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 PCNAP12004 261 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 CASP2P42575 452 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 KCNC1P48547 511 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 ARHGDIAP52565 204 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 NKX2-5P52952 324 aaPredicted RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 LSM3P62310 102 aaKnown RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 TRIP4Q15650 581 aaPredicted RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 BRMS1LQ5PSV4 323 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 VARS2Q5ST30 1063 aaKnown RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 CELF3Q5SZQ8 465 aaKnown RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 SHQ1Q6PI26 577 aaKnown RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 LIMS2Q7Z4I7 341 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 REM2Q8IYK8 340 aaPredicted RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 UBQLNLQ8IYU4 475 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 DNAJB8Q8NHS0 232 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 STAG3L4Q8TBR4 150 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 TMCO6Q96DC7 493 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 RPL10LQ96L21 214 aaKnown RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 ATOH8Q96SQ7 321 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 TRIM8Q9BZR9 551 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 ARHGAP39Q9C0H5 1083 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 OR12D3Q9UGF7 316 aa15.66■□□□□ 0.1
SCLT1-208ENST00000506368 UBQLN1Q9UMX0 589 aaKnown RBP15.66■□□□□ 0.1
SCLT1-208ENST00000506368 ZBBXA8MT70 800 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 MT-CYBP00156 380 aaPredicted RBP15.65■□□□□ 0.1
SCLT1-208ENST00000506368 ALDH1A1P00352 501 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 MYCP01106 439 aaPredicted RBP15.65■□□□□ 0.1
SCLT1-208ENST00000506368 GJB1P08034 283 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 MTHFD2P13995 350 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 CTGFP29279 349 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 TGFBR2P37173 567 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 OR2B6P58173 313 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 ATAD3CQ5T2N8 411 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 C9orf57Q5W0N0 161 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 TMEM207Q6UWW9 146 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 TSPYL5Q86VY4 417 aaPredicted RBP15.65■□□□□ 0.1
SCLT1-208ENST00000506368 PROKR1Q8TCW9 393 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 ZNF583Q96ND8 569 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 COLEC11Q9BWP8 271 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 ALOXE3Q9BYJ1 711 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 RGS18Q9NS28 235 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 SNTG2Q9NY99 539 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 GIMAP2Q9UG22 337 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 ADGRE2Q9UHX3 823 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 TMEFF2Q9UIK5 374 aaPredicted RBP15.65■□□□□ 0.1
SCLT1-208ENST00000506368 NUDT5Q9UKK9 219 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 SHROOM3Q8TF72 1996 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms