RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ORC6Q9Y5N6 252 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 PNMA8CA0A1B0GUJ8 204 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 KRT87PA6NCN2 255 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 TTC34A8MYJ7 566 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 J3KR12 359 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 HOXC11O43248 304 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 NUAK1O60285 661 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 SCO1O75880 301 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 RHOBTB1O94844 696 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 LRATO95237 230 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 SLC2A4P14672 509 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 RPS12P25398 132 aaKnown RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 AQP1P29972 269 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 CYP2C18P33260 490 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 TGM4P49221 684 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 TAF6P49848 677 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 CDKN1CP49918 316 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 AFF1P51825 1210 aaKnown RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 RAB15P59190 212 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 ZNF280AP59817 542 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 HMGCS1Q01581 520 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 C9orf57Q5W0N0 161 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 SMYD5Q6GMV2 418 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 C8orf82Q6P1X6 216 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 SYVN1Q86TM6 617 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 CYP4Z1Q86W10 505 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 CIR1Q86X95 450 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 METTL4Q8N3J2 472 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 TCAIMQ8N3R3 496 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 BEND7Q8N7W2 519 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 MUL1Q969V5 352 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 TNIP3Q96KP6 325 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 RMND5AQ9H871 391 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 GMIPQ9P107 970 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 ABCD2Q9UBJ2 740 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 INTS6Q9UL03 887 aaKnown RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 B3GNT3Q9Y2A9 372 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 LOXHD1Q8IVV2 1947 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 SMIM28A0A1B0GU29 152 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 GAS2O43903 313 aaKnown RBP7.51□□□□□ -1.21
NEDD9-208ENST00000504387 CPNE3O75131 537 aaKnown RBP7.51□□□□□ -1.21
NEDD9-208ENST00000504387 SERPINA1P01009 418 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 POMCP01189 267 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 FHP07954 510 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 SLC10A3P09131 477 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 GADD45AP24522 165 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 OR2B6P58173 313 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 E2F2Q14209 437 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 PSMD5Q16401 504 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 RUNDC3AQ59EK9 446 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 CEP78Q5JTW2 689 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 VARS2Q5ST30 1063 aaKnown RBP7.51□□□□□ -1.21
NEDD9-208ENST00000504387 GPR153Q6NV75 609 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 CLEC20AQ6ZU45 233 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 FKBP9P1Q75LS8 142 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 LRRC8DQ7L1W4 858 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 GDPD3Q7L5L3 318 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 SLC22A9Q8IVM8 553 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 GALNT12Q8IXK2 581 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 KRTCAP2Q8N6L1 136 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 ATG16L2Q8NAA4 619 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 GPR152Q8TDT2 470 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 S100ZQ8WXG8 99 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.51□□□□□ -1.21
NEDD9-208ENST00000504387 MRGPRX2Q96LB1 330 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 MMP28Q9H239 520 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 BPIFA1Q9NP55 256 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 SDR39U1Q9NRG7 319 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-208ENST00000504387 COMMD8Q9NX08 183 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 CD274Q9NZQ7 290 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 LEF1Q9UJU2 399 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-208ENST00000504387 ZNF221Q9UK13 617 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 AAR2Q9Y312 384 aaKnown RBP7.51□□□□□ -1.21
NEDD9-208ENST00000504387 PCDHGA10Q9Y5H3 936 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 GMPPBQ9Y5P6 360 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 PRRC2BQ5JSZ5 2229 aaKnown RBP7.51□□□□□ -1.21
NEDD9-208ENST00000504387 COL11A2P13942 1736 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-208ENST00000504387 TNS1Q9HBL0 1735 aaKnown RBP7.51□□□□□ -1.21
NEDD9-208ENST00000504387 CTDSP2O14595 271 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 AIREO43918 545 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 FKBP9O95302 570 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 RAP2AP10114 183 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 NPR3P17342 541 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 LIPAP38571 399 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 GDF5P43026 501 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 IDH2P48735 452 aaKnown RBP7.51□□□□□ -1.21
NEDD9-208ENST00000504387 PGFP49763 221 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 DNAJB13P59910 316 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 ISL1P61371 349 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 NKX3-2P78367 333 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 ZFP69Q49AA0 526 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 ZNF484Q5JVG2 852 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 KIAA0319Q5VV43 1072 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 ZCCHC8Q6NZY4 707 aaKnown RBP7.51□□□□□ -1.21
NEDD9-208ENST00000504387 NOTUMQ6P988 496 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 SLC27A1Q6PCB7 646 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 B3GNT8Q7Z7M8 397 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 C10orf111Q8N326 155 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 DTX3Q8N9I9 347 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 ST13P5Q8NFI4 369 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms