RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 DHRS7BQ6IAN0 325 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 OR7E24Q6IFN5 339 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 RPUSD3Q6P087 351 aaKnown RBP2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 GTF2H2CQ6P1K8 395 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 SPSB3Q6PJ21 355 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 ASB18Q6ZVZ8 466 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 C16orf82Q7Z2V1 217 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 ARMC9Q7Z3E5 817 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 VSIG1Q86XK7 387 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 TMEM219Q86XT9 240 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 C1orf52Q8N6N3 182 aaKnown RBP2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF441Q8N8Z8 693 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 KCNH5Q8NCM2 988 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 RBM15BQ8NDT2 890 aaKnown RBP2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 OR52I2Q8NH67 350 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 BBS10Q8TAM1 723 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 LPGAT1Q92604 370 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 PHF21AQ96BD5 680 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 RADILQ96JH8 1075 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 DGAT2Q96PD7 388 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 ADPGKQ9BRR6 497 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 SYT17Q9BSW7 474 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 CCDC106Q9BWC9 280 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 CSTL1Q9H114 145 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 SEMA6AQ9H2E6 1030 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 GOLPH3LQ9H4A5 285 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 DENND2DQ9H6A0 471 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 LRRC4Q9HBW1 653 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 TCP11L1Q9NUJ3 509 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 RCC2Q9P258 522 aaKnown RBP2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 KLHL9Q9P2J3 617 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 GIMAP2Q9UG22 337 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZHX1Q9UKY1 873 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 ISY1Q9ULR0 285 aaKnown RBP2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 IGHV4OR15-8A0A075B7B6 117 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZCWPW2A0A1B0GU75 182 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 PLSCR5A0PG75 271 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 OR2M5A3KFT3 312 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 OR5K3A6NET4 321 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 ERI2A8K979 691 aaKnown RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 H7C0S8 307 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 UBE2CO00762 179 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 EIF3DO15371 548 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 IPO8O15397 1037 aaKnown RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 PRAMEF11O60813 436 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 CREG1O75629 220 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 PSMD10O75832 226 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 WISP2O76076 250 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 BMP10O95393 424 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 PPP1R3DO95685 299 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 FAM106CPP0CH98 169 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 CDH1P12830 882 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 GM2AP17900 193 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 DNASE1P24855 282 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 GABRA5P31644 462 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 USP8P40818 1118 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 IL15P40933 162 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 CLK1P49759 484 aaKnown RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 TAF6P49848 677 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 PPP5CP53041 499 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 CDH13P55290 713 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 EEF1A1P68104 462 aaKnown RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 SIRPAP78324 504 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 RUNX1T1Q06455 604 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 GAGE2BQ13066 116 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 SNTB1Q13884 538 aaKnown RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 SCARB2Q14108 478 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 RBM39Q14498 530 aaKnown RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 IL11RAQ14626 422 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 MELKQ14680 651 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZRSR1Q15695 479 aaKnown RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 SNAPC1Q16533 368 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 IZUMO4Q1ZYL8 232 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 LETM2Q2VYF4 491 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 GAGE2EQ4V326 116 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 RAB6CQ53S08 254 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 C9orf152Q5JTZ5 239 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 SLC10A5Q5PT55 438 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 ERMARDQ5T6L9 678 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 EEF1A1P5Q5VTE0 462 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 C9orf57Q5W0N0 161 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 TMEM211Q6ICI0 200 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 GAGE2AQ6NT46 116 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 ADAM5Q6NVV9 412 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 TEX38Q6PEX7 206 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 PRSS57Q6UWY2 283 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 UNQ6126/PRO20091Q6UXV3 157 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF704Q6ZNC4 412 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 DENND5BQ6ZUT9 1274 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 Q75L30 129 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 PLPPR4Q7Z2D5 763 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 ADIPOR2Q86V24 386 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 CEP57Q86XR8 500 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 KMT5CQ86Y97 462 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 GBGT1Q8N5D6 347 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 WDR20Q8TBZ3 569 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 TAS1R2Q8TE23 839 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZFAND2BQ8WV99 257 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 RSPH1Q8WYR4 309 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms