RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 IFITM10A6NMD0 228 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 EIF4E1BA6NMX2 242 aaKnown RBP5.6□□□□□ -1.51
NIPBL-203ENST00000503274 FAM90A26D6RGX4 464 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 PRR23D1E9PI22 279 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-203ENST00000503274 ANKRD28O15084 1053 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 OR2C1O95371 312 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 F7P08709 466 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-203ENST00000503274 PRR23D2P0DMB1 279 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-203ENST00000503274 ACTN1P12814 892 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 DGKAP23743 735 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 ISL1P61371 349 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 SREBF2Q12772 1141 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 MAPRE1Q15691 268 aaKnown RBP5.6□□□□□ -1.51
NIPBL-203ENST00000503274 PCGF3Q3KNV8 242 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 NSUN5P2Q63ZY6 315 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 PMS2CLQ68D20 193 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 LCN10Q6JVE6 187 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 NR2C2APQ86WQ0 139 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 TEX11Q8IYF3 940 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 TTC39CQ8N584 583 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 HJURPQ8NCD3 748 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-203ENST00000503274 CD101Q93033 1021 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 PGAM5Q96HS1 289 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 TIGD1Q96MW7 591 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 OR2A14Q96R47 310 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 TMEM39BQ9GZU3 492 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 EPB41L5Q9HCM4 733 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 KLHL1Q9NR64 748 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 BLOC1S4Q9NUP1 217 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 SETD4Q9NVD3 440 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 RALYQ9UKM9 306 aaKnown RBP5.6□□□□□ -1.51
NIPBL-203ENST00000503274 ZNF831Q5JPB2 1677 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 ATP10DQ9P241 1426 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 USP42Q9H9J4 1324 aaKnown RBP5.59□□□□□ -1.51
NIPBL-203ENST00000503274 ASPDHA6ND91 283 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 PTGES3LE9PB15 166 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 AP3D1O14617 1153 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 HS6ST1O60243 411 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 GPC4O75487 556 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 KCNK5O95279 499 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 ANXA7P20073 488 aaKnown RBP5.59□□□□□ -1.51
NIPBL-203ENST00000503274 ACADLP28330 430 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 CDH8P55286 799 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 DLX5P56178 289 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 EEF1A1P68104 462 aaKnown RBP5.59□□□□□ -1.51
NIPBL-203ENST00000503274 GTF2H2Q13888 395 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 ZNF234Q14588 700 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 MTHFSDQ2M296 383 aaKnown RBP5.59□□□□□ -1.51
NIPBL-203ENST00000503274 CCDC96Q2M329 555 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 ASTE1Q2TB18 679 aaPredicted RBP5.59□□□□□ -1.51
NIPBL-203ENST00000503274 TMEM35AQ53FP2 167 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 FAM76BQ5HYJ3 339 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 EEF1A1P5Q5VTE0 462 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 GTF2H2CQ6P1K8 395 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 ASB18Q6ZVZ8 466 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 CHST9Q7L1S5 443 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 MAP7D3Q8IWC1 876 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 MAB21L3Q8N8X9 362 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 FEM1CQ96JP0 617 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 TREX2Q9BQ50 279 aaPredicted RBP5.59□□□□□ -1.51
NIPBL-203ENST00000503274 DONSONQ9NYP3 566 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 ICAM5Q9UMF0 924 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 OR2W1Q9Y3N9 320 aa5.59□□□□□ -1.51
NIPBL-203ENST00000503274 CNTNAP2Q9UHC6 1331 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 MAP2K7O14733 419 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 OGG1O15527 345 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 DOK2O60496 412 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 SRPRAP08240 638 aaKnown RBP5.58□□□□□ -1.52
NIPBL-203ENST00000503274 CLTBP09497 229 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 DPEP1P16444 411 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 AMD1P17707 334 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 HADHAP40939 763 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 CAMPP49913 170 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 EIF5P55010 431 aaKnown RBP5.58□□□□□ -1.52
NIPBL-203ENST00000503274 NAP1L1P55209 391 aaKnown RBP5.58□□□□□ -1.52
NIPBL-203ENST00000503274 SLC39A6Q13433 755 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 ZRSR1Q15695 479 aaKnown RBP5.58□□□□□ -1.52
NIPBL-203ENST00000503274 KRTCAP3Q53RY4 240 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 HYIQ5T013 277 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 KIAA0930Q6ICG6 404 aaPredicted RBP5.58□□□□□ -1.52
NIPBL-203ENST00000503274 CFAP77Q6ZQR2 320 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 C9orf139Q6ZV77 190 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 ZNF771Q7L3S4 317 aaPredicted RBP5.58□□□□□ -1.52
NIPBL-203ENST00000503274 TMPRSS12Q86WS5 348 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 ADGRF2Q8IZF7 708 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 MUC20Q8N307 709 aaPredicted RBP5.58□□□□□ -1.52
NIPBL-203ENST00000503274 IL17RCQ8NAC3 791 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 UTP15Q8TED0 518 aaKnown RBP5.58□□□□□ -1.52
NIPBL-203ENST00000503274 TRPC4APQ8TEL6 797 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 SLC38A5Q8WUX1 472 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 SLC44A1Q8WWI5 657 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 PLK3Q9H4B4 646 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 SMARCAD1Q9H4L7 1026 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 TBC1D22BQ9NU19 505 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 FBXL17Q9UF56 701 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 NARFQ9UHQ1 456 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 ZNF711Q9Y462 761 aa5.58□□□□□ -1.52
NIPBL-203ENST00000503274 C10orf71Q711Q0 1435 aa5.57□□□□□ -1.52
NIPBL-203ENST00000503274 SOS1Q07889 1333 aaPredicted RBP5.57□□□□□ -1.52
NIPBL-203ENST00000503274 A0A1W2PS18 150 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms