RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 AASDHQ4L235 1098 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 TTC33Q6PID6 262 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 CERS6Q6ZMG9 384 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 ALDH16A1Q8IZ83 802 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 OFCC1Q8IZS5 231 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 APCDD1Q8J025 514 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 DTWD1Q8N5C7 304 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 CYGBQ8WWM9 190 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 TRMT2BQ96GJ1 504 aaKnown RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 IGSF21Q96ID5 467 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 C17orf80Q9BSJ5 609 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 SOX17Q9H6I2 414 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 ASB8Q9H765 288 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 DNMT3BQ9UBC3 853 aaKnown RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 ZMYM5Q9UJ78 669 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 PTBP2Q9UKA9 531 aaKnown RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 CCL27Q9Y4X3 112 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 TNPO3Q9Y5L0 923 aaKnown RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 COL4A6Q14031 1691 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 C1orf232A0A0U1RR37 186 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 GRXCR2A6NFK2 248 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 RAD51BO15315 384 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 TRMUO75648 421 aaKnown RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 OTCP00480 354 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 NPPAP01160 153 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 S100BP04271 92 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 UMPSP11172 480 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 ZNF7P17097 686 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 RPS3P23396 243 aaKnown RBP eCLIP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 VARSP26640 1264 aaKnown RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 GDF5P43026 501 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 PIK3CGP48736 1102 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 RPL38P63173 70 aaKnown RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 NFATC2Q13469 925 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 CDH18Q13634 790 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 GLYATQ6IB77 296 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 TBPL2Q6SJ96 375 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 TBC1D21Q8IYX1 336 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 HJURPQ8NCD3 748 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 CHID1Q9BWS9 393 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 APOL5Q9BWW9 433 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 LIN28AQ9H9Z2 209 aaKnown RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 ZFYVE1Q9HBF4 777 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 IL26Q9NPH9 171 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 TMEM45AQ9NWC5 275 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 EVLQ9UI08 416 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 GNPTGQ9UJJ9 305 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 TRIM64CA6NLI5 447 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 ARNTLO00327 626 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 GFRA2O00451 464 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 PITPNM1O00562 1244 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 FFAR3O14843 346 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 GPR42O15529 346 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 SLC25A14O95258 325 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-204ENST00000501271 TRIM16O95361 564 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 CLDN7O95471 211 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 SNAP29O95721 258 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 GLUD1P00367 558 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 LDLRP01130 860 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 C7P10643 843 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 CHRM1P11229 460 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-204ENST00000501271 UGT1A1P22309 533 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 UGT1A4P22310 534 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 JAK1P23458 1154 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 HMOX2P30519 316 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 UGT1A3P35503 534 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 UGT1A5P35504 534 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 RPS9P46781 194 aaKnown RBP9.69□□□□□ -0.86
CLIP1-204ENST00000501271 CDK9P50750 372 aaKnown RBP9.69□□□□□ -0.86
CLIP1-204ENST00000501271 AP1S1P61966 158 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 PTGR1Q14914 329 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 KIAA0040Q15053 153 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 TMEM259Q4ZIN3 620 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 CYBRD1Q53TN4 286 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.69□□□□□ -0.86
CLIP1-204ENST00000501271 LPCAT2Q7L5N7 544 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 SNX20Q7Z614 316 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 MILR1Q7Z6M3 343 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 PROSER1Q86XN7 944 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 RBFAQ8N0V3 343 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 DCAF4L2Q8NA75 395 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 TNIP2Q8NFZ5 429 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 MAGEE2Q8TD90 523 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-204ENST00000501271 BPIFB1Q8TDL5 484 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 PXYLP1Q8TE99 480 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 VPS50Q96JG6 964 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 NSMCE2Q96MF7 247 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 RNF145Q96MT1 663 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 CGREF1Q99674 301 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 ZNF334Q9HCZ1 680 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-204ENST00000501271 HMX1Q9NP08 348 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-204ENST00000501271 FARSBQ9NSD9 589 aaKnown RBP9.69□□□□□ -0.86
CLIP1-204ENST00000501271 SMPD3Q9NY59 655 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-204ENST00000501271 THEGQ9P2T0 379 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 ZNF639Q9UID6 485 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 OARD1Q9Y530 152 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 PCDHB3Q9Y5E6 796 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 FADS3Q9Y5Q0 445 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 KIAA1671Q9BY89 1806 aa9.69□□□□□ -0.86
CLIP1-204ENST00000501271 MKI67P46013 3256 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms