RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 LMNTD2Q8IXW0 634 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 KRT222Q8N1A0 295 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 DCBLD1Q8N8Z6 715 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 NOA1Q8NC60 698 aaKnown RBP16.41■□□□□ 0.22
PRKCB-210ENST00000498739 FBXO36Q8NEA4 188 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 SPDYE1Q8NFV5 336 aaPredicted RBP16.41■□□□□ 0.22
PRKCB-210ENST00000498739 LKAAEAR1Q8TD35 194 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 CALML6Q8TD86 181 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 LPGAT1Q92604 370 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 ART4Q93070 314 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 RMDN2Q96LZ7 410 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 INSM2Q96T92 566 aaPredicted RBP16.41■□□□□ 0.22
PRKCB-210ENST00000498739 FAM167BQ9BTA0 163 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 CARD6Q9BX69 1037 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 ZMYND15Q9H091 742 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 IARS2Q9NSE4 1012 aaKnown RBP16.41■□□□□ 0.22
PRKCB-210ENST00000498739 ATXN7L1Q9ULK2 861 aaPredicted RBP16.41■□□□□ 0.22
PRKCB-210ENST00000498739 CRYL1Q9Y2S2 319 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 MSRB2Q9Y3D2 182 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 CFAP20Q9Y6A4 193 aaKnown RBP16.41■□□□□ 0.22
PRKCB-210ENST00000498739 CNOT1A5YKK6 2376 aaKnown RBP16.4■□□□□ 0.22
PRKCB-210ENST00000498739 IGHV1OR21-1A0A087WYE8 117 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 ESYT3A0FGR9 886 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 FAM221BA6H8Z2 402 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 D6RAR5 112 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 E7ESA3 106 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 LIN7AO14910 233 aaPredicted RBP16.4■□□□□ 0.22
PRKCB-210ENST00000498739 CSO75390 466 aaKnown RBP16.4■□□□□ 0.22
PRKCB-210ENST00000498739 F7P08709 466 aaPredicted RBP16.4■□□□□ 0.22
PRKCB-210ENST00000498739 ERVK-10P10266 1014 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 MTHFD1P11586 935 aaKnown RBP16.4■□□□□ 0.22
PRKCB-210ENST00000498739 PDHA2P29803 388 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 FMO4P31512 558 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 SLC1A2P43004 574 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 MAPK9P45984 424 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 CTBP1Q13363 440 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 FASTKD3Q14CZ7 662 aaKnown RBP16.4■□□□□ 0.22
PRKCB-210ENST00000498739 TRADDQ15628 312 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 NKAIN2Q5VXU1 208 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 DUS1LQ6P1R4 473 aaKnown RBP16.4■□□□□ 0.22
PRKCB-210ENST00000498739 CCNI2Q6ZMN8 369 aaPredicted RBP16.4■□□□□ 0.22
PRKCB-210ENST00000498739 ZBED8Q8IZ13 594 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 CACTIN-AS1Q8N1I8 211 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 CERS2Q96G23 380 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 AHCYL2Q96HN2 611 aaKnown RBP16.4■□□□□ 0.22
PRKCB-210ENST00000498739 PANX3Q96QZ0 392 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 TBC1D10AQ9BXI6 508 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 RDH14Q9HBH5 336 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 EPB41L5Q9HCM4 733 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 FBXO6Q9NRD1 293 aaPredicted RBP16.4■□□□□ 0.22
PRKCB-210ENST00000498739 INTS10Q9NVR2 710 aaKnown RBP16.4■□□□□ 0.22
PRKCB-210ENST00000498739 VPS9D1Q9Y2B5 631 aa16.4■□□□□ 0.22
PRKCB-210ENST00000498739 CACNA1AO00555 2505 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 LILRA5A6NI73 299 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 IFRD1O00458 451 aaPredicted RBP16.39■□□□□ 0.21
PRKCB-210ENST00000498739 CD1CP29017 333 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 CCR7P32248 378 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 CSE1LP55060 971 aaKnown RBP16.39■□□□□ 0.21
PRKCB-210ENST00000498739 GPLD1P80108 840 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 GUCY2DQ02846 1103 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 RPA4Q13156 261 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 GPR18Q14330 331 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 ISXQ2M1V0 245 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 ZNF789Q5FWF6 425 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 CTSL3PQ5NE16 218 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 CAPRIN2Q6IMN6 1127 aaKnown RBP16.39■□□□□ 0.21
PRKCB-210ENST00000498739 TMEM26Q6ZUK4 368 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 USP53Q70EK8 1073 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 RBM12BQ8IXT5 1001 aaKnown RBP16.39■□□□□ 0.21
PRKCB-210ENST00000498739 OR10G6Q8NH81 332 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 GABPB2Q8TAK5 448 aaPredicted RBP16.39■□□□□ 0.21
PRKCB-210ENST00000498739 FBXO25Q8TCJ0 367 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 TMEM159Q96B96 161 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 OR52A5Q9H2C5 316 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 PLAC1Q9HBJ0 212 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 SLC40A1Q9NP59 571 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 SAYSD1Q9NPB0 183 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 PPANQ9NQ55 473 aaKnown RBP16.39■□□□□ 0.21
PRKCB-210ENST00000498739 FBXO5Q9UKT4 447 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 PCDHB1Q9Y5F3 818 aa16.39■□□□□ 0.21
PRKCB-210ENST00000498739 ARHGEF17Q96PE2 2063 aaPredicted RBP16.38■□□□□ 0.21
PRKCB-210ENST00000498739 SLC5A10A0PJK1 596 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 EIF3HO15372 352 aaKnown RBP eCLIP16.38■□□□□ 0.21
PRKCB-210ENST00000498739 DUX1O43812 170 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 CPNE6O95741 557 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 S1PR4O95977 384 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 ESR1P03372 595 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 CARSP49589 748 aaKnown RBP16.38■□□□□ 0.21
PRKCB-210ENST00000498739 PDX1P52945 283 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 EPHA4P54764 986 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 MPP1Q00013 466 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 HSPA14Q0VDF9 509 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 KRT33BQ14525 404 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 STEAP4Q687X5 459 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 ZDHHC24Q6UX98 284 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 PIM3Q86V86 326 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 CCDC25Q86WR0 208 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 BIRC8Q96P09 236 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 NUDT22Q9BRQ3 303 aa16.38■□□□□ 0.21
PRKCB-210ENST00000498739 FOXP3Q9BZS1 431 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms