RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 GAPDHSO14556 408 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-212ENST00000498540 CBX6O95503 412 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 VARSP26640 1264 aaKnown RBP14.31□□□□□ -0.12
TRAF4-212ENST00000498540 SPAM1P38567 509 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 PDK1Q15118 436 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 PPP2R5EQ16537 467 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 PTCHD3Q3KNS1 767 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 PLEKHN1Q494U1 663 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-212ENST00000498540 ZNF789Q5FWF6 425 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 LDLRAP1Q5SW96 308 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 FNBP1LQ5T0N5 605 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 GPRC6AQ5T6X5 926 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 CCDC70Q6NSX1 233 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 ARMC6Q6NXE6 501 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 MED25Q71SY5 747 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 SYTL1Q8IYJ3 562 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 TMEM102Q8N9M5 508 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-212ENST00000498540 OR1L3Q8NH93 324 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 SYN2Q92777 582 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-212ENST00000498540 C12orf66Q96MD2 445 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 SRPK1Q96SB4 655 aaKnown RBP14.31□□□□□ -0.12
TRAF4-212ENST00000498540 NAT10Q9H0A0 1025 aaKnown RBP14.31□□□□□ -0.12
TRAF4-212ENST00000498540 KIR3DX1Q9H7L2 352 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 IL17CQ9P0M4 197 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 FAM8A1Q9UBU6 413 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 A0A0A6YYK5 440 aaPredicted RBP14.3□□□□□ -0.12
TRAF4-212ENST00000498540 GLYATL1P3A0A0U1RQE8 302 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 A0A1W2PQJ5 194 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 TMEM150CB9EJG8 249 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 APOL1O14791 398 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 BUD23O43709 281 aaKnown RBP14.3□□□□□ -0.12
TRAF4-212ENST00000498540 POLR2CP19387 275 aaPredicted RBP14.3□□□□□ -0.12
TRAF4-212ENST00000498540 PTPN3P26045 913 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 CHRNA4P43681 627 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 RRADP55042 308 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 SIRPB2Q5JXA9 342 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 KDELC1Q6UW63 502 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 DET1Q7L5Y6 550 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 TICAM1Q8IUC6 712 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 IQCKQ8N0W5 287 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 CARFQ8N187 725 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 CISD2Q8N5K1 135 aaKnown RBP14.3□□□□□ -0.12
TRAF4-212ENST00000498540 DTX3LQ8TDB6 740 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.3□□□□□ -0.12
TRAF4-212ENST00000498540 RANBP9Q96S59 729 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 PACSIN1Q9BY11 444 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 ACTR5Q9H9F9 607 aaPredicted RBP14.3□□□□□ -0.12
TRAF4-212ENST00000498540 FANCEQ9HB96 536 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 UVRAGQ9P2Y5 699 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 POMT2Q9UKY4 750 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 SLC5A6Q9Y289 635 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 DNMT3AQ9Y6K1 912 aaPredicted RBP14.3□□□□□ -0.12
TRAF4-212ENST00000498540 CCDC88CQ9P219 2028 aa14.3□□□□□ -0.12
TRAF4-212ENST00000498540 CROCCQ5TZA2 2017 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 SEC16AO15027 2179 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 LOC285095A0A1B0GVY8 99 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 SMTNL1A8MU46 457 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 ZNF487B1APH4 448 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 PPP1R12AO14974 1030 aaPredicted RBP14.29□□□□□ -0.12
TRAF4-212ENST00000498540 HLA-DPA1P20036 260 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 CDH3P22223 829 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 AKT1P31749 480 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 CD68P34810 354 aaPredicted RBP14.29□□□□□ -0.12
TRAF4-212ENST00000498540 WNT3AP56704 352 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 DYNLT1P63172 113 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 NCF4Q15080 339 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 KYNUQ16719 465 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 TEX44Q53QW1 395 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 VWA5B1Q5TIE3 1220 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 ZDHHC20Q5W0Z9 365 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 SLC25A41Q8N5S1 370 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 LILRA3Q8N6C8 439 aaPredicted RBP14.29□□□□□ -0.12
TRAF4-212ENST00000498540 OR4E2Q8NGC2 313 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 CPLX3Q8WVH0 158 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 ZFPM2Q8WW38 1151 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 SGSM3Q96HU1 749 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 RMDN2Q96LZ7 410 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 TEKT5Q96M29 485 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 C5orf34Q96MH7 638 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 NRTNQ99748 197 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 TRABDQ9H4I3 376 aa14.29□□□□□ -0.12
TRAF4-212ENST00000498540 ANKUB1A6NFN9 424 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 MGAT4DA6NG13 374 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 F5H423 210 aaPredicted RBP14.28□□□□□ -0.12
TRAF4-212ENST00000498540 SERPINC1P01008 464 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 SLC35G4P0C7Q5 338 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 ST6GAL1P15907 406 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 NFKB1P19838 968 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 CYP2A7P20853 494 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 TNFRSF8P28908 595 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 HNRNPH3P31942 346 aaKnown RBP14.28□□□□□ -0.12
TRAF4-212ENST00000498540 OTX2P32243 289 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 PBX1P40424 430 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 PREPP48147 710 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 LMAN1P49257 510 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 ZBED6P86452 979 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 ITGA9Q13797 1035 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 MESDQ14696 234 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 PTPRCAPQ14761 206 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 LONRF2Q1L5Z9 754 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms