RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 SCUBE2Q9NQ36 999 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 CMTM6Q9NX76 183 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 NUDT4Q9NZJ9 180 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 CFAP97Q9P2B7 532 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 ATXN10Q9UBB4 475 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 RSL24D1Q9UHA3 163 aaKnown RBP12.27□□□□□ -0.45
AFF3-215ENST00000498090 PRRC2BQ5JSZ5 2229 aaKnown RBP12.27□□□□□ -0.45
AFF3-215ENST00000498090 FAM234BA2RU67 622 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 CCDC154A6NI56 674 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 TRIM64CA6NLI5 447 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 SNAP91O60641 907 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 TIPRLO75663 272 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 RASAL1O95294 804 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 MT-CO1P00395 513 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 LINC00032P0C843 101 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 ETS2P15036 469 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 CDH2P19022 906 aaPredicted RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 MYF6P23409 242 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 FSHRP23945 695 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 HTR1EP28566 365 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 TTKP33981 857 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 PTGER3P43115 390 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 CDK9P50750 372 aaKnown RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 SGSHP51688 502 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 FOXA1P55317 472 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 ESRRGP62508 458 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 GK3PQ14409 553 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 FXNQ16595 210 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 GET4Q7L5D6 327 aaPredicted RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 AMIGO2Q86SJ2 522 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 CIR1Q86X95 450 aaPredicted RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 OR4K2Q8NGD2 314 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 ADAMTS16Q8TE57 1224 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 SH3RF2Q8TEC5 729 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 OSCP1Q8WVF1 389 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 POP5Q969H6 163 aaKnown RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 TMEM125Q96AQ2 219 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 MSLNLQ96KJ4 702 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 SLC29A1Q99808 456 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 HGH1Q9BTY7 390 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 ALG2Q9H553 416 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 OLAHQ9NV23 265 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 PCTPQ9UKL6 214 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 MED16Q9Y2X0 877 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 CEPT1Q9Y6K0 416 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 SOBPA7XYQ1 873 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 GFRA2O00451 464 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 BTN3A1O00481 513 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 ARPC2O15144 300 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 ENO2P09104 434 aaPredicted RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 CCT8P50990 548 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 ZNF177Q13360 481 aaPredicted RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 CYTH1Q15438 398 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 TSNQ15631 228 aaKnown RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 ATP6AP1Q15904 470 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 ZNF77Q15935 545 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 PTPRNQ16849 979 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 SMU1Q2TAY7 513 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 SETMARQ53H47 684 aaPredicted RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 CERS6Q6ZMG9 384 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 GPRIN3Q6ZVF9 776 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 ARHGAP22Q7Z5H3 698 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 SPRED1Q7Z699 444 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 GPSM1Q86YR5 675 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 SPPL2CQ8IUH8 684 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 ERI1Q8IV48 349 aaKnown RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 ADGRG5Q8IZF4 528 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 MYO1HQ8N1T3 1032 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 DPP10Q8N608 796 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 TERB1Q8NA31 727 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 TTC16Q8NEE8 873 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 MAFAQ8NHW3 353 aaPredicted RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 LZICQ8WZA0 190 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 RSPRY1Q96DX4 576 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 BIRC8Q96P09 236 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 NSUN5Q96P11 429 aaKnown RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 GAS2L1Q99501 681 aaPredicted RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 GPR21Q99679 349 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 KCTD14Q9BQ13 255 aaPredicted RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 SLC39A3Q9BRY0 314 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 SEMA4BQ9NPR2 832 aaPredicted RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 DUS2Q9NX74 493 aaKnown RBP12.26□□□□□ -0.45
AFF3-215ENST00000498090 STOML2Q9UJZ1 356 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 AURKCQ9UQB9 309 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 FAM50BQ9Y247 325 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 PCDHB1Q9Y5F3 818 aa12.26□□□□□ -0.45
AFF3-215ENST00000498090 HELZP42694 1942 aaKnown RBP12.25□□□□□ -0.45
AFF3-215ENST00000498090 A0A0D9SEW6 157 aa12.25□□□□□ -0.45
AFF3-215ENST00000498090 A0A1B0GVM2 712 aa12.25□□□□□ -0.45
AFF3-215ENST00000498090 TRIM64A6NGJ6 449 aa12.25□□□□□ -0.45
AFF3-215ENST00000498090 TRMUO75648 421 aaKnown RBP12.25□□□□□ -0.45
AFF3-215ENST00000498090 LATS1O95835 1130 aa12.25□□□□□ -0.45
AFF3-215ENST00000498090 RHOCP08134 193 aa12.25□□□□□ -0.45
AFF3-215ENST00000498090 ARSAP15289 507 aa12.25□□□□□ -0.45
AFF3-215ENST00000498090 PCSK2P16519 638 aa12.25□□□□□ -0.45
AFF3-215ENST00000498090 HOXB6P17509 224 aaKnown RBP12.25□□□□□ -0.45
AFF3-215ENST00000498090 MSH3P20585 1137 aa12.25□□□□□ -0.45
AFF3-215ENST00000498090 SCNN1BP51168 640 aa12.25□□□□□ -0.45
AFF3-215ENST00000498090 POLR2JP52435 117 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms