RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 APOA4P06727 396 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 INHBAP08476 426 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 GSTM1P09488 218 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 SLC35G4P0C7Q5 338 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 F3P13726 295 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 AOAHP28039 575 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 PDHA2P29803 388 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 SPRP35270 261 aaPredicted RBP11.66□□□□□ -0.54
CUX1-210ENST00000497815 PLA2G5P39877 138 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 MSH2P43246 934 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 CLCN7P51798 805 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 GSTM4Q03013 218 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 BMPR2Q13873 1038 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 ZNF658BQ4V348 819 aaPredicted RBP11.66□□□□□ -0.54
CUX1-210ENST00000497815 C6orf132Q5T0Z8 1188 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 GRTP1Q5TC63 336 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 FAM45BPQ6NSW5 357 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 LVRNQ6Q4G3 990 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 VRK3Q8IV63 474 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 SDR16C5Q8N3Y7 309 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 ZBTB2Q8N680 514 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 KYQ8NBH2 561 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 GIMAP7Q8NHV1 300 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 FAM45AQ8TCE6 357 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 SKA2Q8WVK7 121 aaPredicted RBP11.66□□□□□ -0.54
CUX1-210ENST00000497815 ASZ1Q8WWH4 475 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 KCNJ9Q92806 393 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 TMEM159Q96B96 161 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 APOLD1Q96LR9 279 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 OLFM1Q99784 485 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 MCMBPQ9BTE3 642 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 DUSP23Q9BVJ7 150 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 CAB39LQ9H9S4 337 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 SCHIP1Q9P0W5 487 aaPredicted RBP11.66□□□□□ -0.54
CUX1-210ENST00000497815 TRMT6Q9UJA5 497 aaKnown RBP11.66□□□□□ -0.54
CUX1-210ENST00000497815 ACSL5Q9ULC5 683 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 SLC39A10Q9ULF5 831 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 CORO1CQ9ULV4 474 aaPredicted RBP11.66□□□□□ -0.54
CUX1-210ENST00000497815 MED16Q9Y2X0 877 aa11.66□□□□□ -0.54
CUX1-210ENST00000497815 CFAP20Q9Y6A4 193 aaKnown RBP11.66□□□□□ -0.54
CUX1-210ENST00000497815 PI4KAP42356 2102 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 SLC5A10A0PJK1 596 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 A6NCN8 305 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 PRR19A6NJB7 356 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 SMIM23A6NLE4 172 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 OR52A4PA6NMU1 304 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 KPNA5O15131 536 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 NOBOXO60393 691 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 ITGA2BP08514 1039 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 BRAFP15056 766 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 HALP42357 657 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 LIMK2P53671 638 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 SLC12A2P55011 1212 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 MAZP56270 477 aaKnown RBP11.65□□□□□ -0.54
CUX1-210ENST00000497815 TAS2R39P59534 338 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 TIAL1Q01085 375 aaKnown RBP eCLIP11.65□□□□□ -0.54
CUX1-210ENST00000497815 PDAP1Q13442 181 aaKnown RBP11.65□□□□□ -0.54
CUX1-210ENST00000497815 BIRC2Q13490 618 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 ZNF460Q14592 562 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 USP10Q14694 798 aaKnown RBP11.65□□□□□ -0.54
CUX1-210ENST00000497815 CLCA4Q14CN2 919 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 MROH9Q5TGP6 573 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 ZCCHC8Q6NZY4 707 aaKnown RBP11.65□□□□□ -0.54
CUX1-210ENST00000497815 DUS1LQ6P1R4 473 aaKnown RBP11.65□□□□□ -0.54
CUX1-210ENST00000497815 DBX2Q6ZNG2 339 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 SLC35F3Q8IY50 421 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 CPNE9Q8IYJ1 553 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 NAGSQ8N159 534 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 ARL10Q8N8L6 244 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 OR2W6PQ8NHA6 318 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 CD200R1Q8TD46 325 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 NETO1Q8TDF5 533 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 SLC37A2Q8TED4 501 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 SLC44A1Q8WWI5 657 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 CNDP2Q96KP4 475 aaKnown RBP11.65□□□□□ -0.54
CUX1-210ENST00000497815 RMDN2Q96LZ7 410 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 CCDC77Q9BR77 488 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 IMP3Q9NV31 184 aaKnown RBP11.65□□□□□ -0.54
CUX1-210ENST00000497815 TAS2R13Q9NYV9 303 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 FTSJ1Q9UET6 329 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 CDYLQ9Y232 598 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 VWA7Q9Y334 891 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 OTOGLQ3ZCN5 2332 aa11.65□□□□□ -0.54
CUX1-210ENST00000497815 ZFHX2Q9C0A1 2572 aaPredicted RBP11.65□□□□□ -0.55
CUX1-210ENST00000497815 PRAMEF33A0A0G2JMD5 474 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 IFRD1O00458 451 aaPredicted RBP11.64□□□□□ -0.55
CUX1-210ENST00000497815 LDOC1O95751 146 aaPredicted RBP11.64□□□□□ -0.55
CUX1-210ENST00000497815 FDXRP22570 491 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 GCAP28676 217 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 SLCO1A2P46721 670 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 LIMK1P53667 647 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 DAB2P98082 770 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 ABRQ12979 859 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 RPA4Q13156 261 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 NR0B2Q15466 257 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 RPE65Q16518 533 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 TTLL9Q3SXZ7 439 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 C14orf28Q4W4Y0 310 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 ACSBG2Q5FVE4 666 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 PLEKHS1Q5SXH7 462 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms