RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 MAGED1Q9Y5V3 778 aaPredicted RBP3.12□□□□□ -1.91
PSPC1-205ENST00000497722 ARHGEF40Q8TER5 1519 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 IGLV5-45A0A087WSX0 123 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 hCG_1809904A0A1W2PP81 198 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 A0A1W2PPE2 198 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 A0A1W2PR64 198 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 MED19A0JLT2 244 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-205ENST00000497722 LNP1A1A4G5 178 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 FAM172BPA6NC97 362 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 SYNDIG1LA6NDD5 238 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 MEIS2O14770 477 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 GPR137BO60478 399 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 SOCS5O75159 536 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 ENTPD3O75355 529 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 PDE9AO76083 593 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 NR3C1P04150 777 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 TPOP07202 933 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 TUBBP07437 444 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 KRT20P35900 424 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 ARCN1P48444 511 aaKnown RBP3.11□□□□□ -1.91
PSPC1-205ENST00000497722 NUCB1Q02818 461 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 MBTD1Q05BQ5 628 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 GAGE2BQ13066 116 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 GAGE5Q13069 117 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 GAGE6Q13070 117 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 SNAPC1Q16533 368 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 TMEM266Q2M3C6 531 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 GAGE2EQ4V326 116 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 LCN10Q6JVE6 187 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 GAGE2AQ6NT46 116 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 FBXL22Q6P050 247 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 ZNF449Q6P9G9 518 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 ZNF534Q76KX8 674 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 PIWIL4Q7Z3Z4 852 aaKnown RBP3.11□□□□□ -1.91
PSPC1-205ENST00000497722 LDB1Q86U70 411 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-205ENST00000497722 TMEM173Q86WV6 379 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-205ENST00000497722 PTOV1Q86YD1 416 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 LINC00346Q8IVM7 164 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 CEP97Q8IW35 865 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 SYT2Q8N9I0 419 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-205ENST00000497722 POMGNT2Q8NAT1 580 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 PPFIBP2Q8ND30 876 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 SLC24A4Q8NFF2 622 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 ZFAND2BQ8WV99 257 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 SECISBP2LQ93073 1101 aaKnown RBP3.11□□□□□ -1.91
PSPC1-205ENST00000497722 LRRC59Q96AG4 307 aaKnown RBP3.11□□□□□ -1.91
PSPC1-205ENST00000497722 PGLYRP2Q96PD5 576 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 UHRF2Q96PU4 802 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 TRAF4Q9BUZ4 470 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-205ENST00000497722 MOV10L1Q9BXT6 1211 aaKnown RBP3.11□□□□□ -1.91
PSPC1-205ENST00000497722 MMP27Q9H306 513 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 KCNK15Q9H427 330 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 BICC1Q9H694 974 aaKnown RBP3.11□□□□□ -1.91
PSPC1-205ENST00000497722 OLFML3Q9NRN5 406 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 TRMT1Q9NXH9 659 aaKnown RBP3.11□□□□□ -1.91
PSPC1-205ENST00000497722 GAGE2DQ9UEU5 116 aa3.11□□□□□ -1.91
PSPC1-205ENST00000497722 TMEM184BQ9Y519 407 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-205ENST00000497722 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.11□□□□□ -1.91
PSPC1-205ENST00000497722 A0A0G2JNG1 304 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 ELOVL7A1L3X0 281 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 OR2M5A3KFT3 312 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 PAK4O96013 591 aaPredicted RBP3.1□□□□□ -1.91
PSPC1-205ENST00000497722 SELLP14151 372 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 PRLRP16471 622 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 BDNFP23560 247 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 DNASE1P24855 282 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 GABRA5P31644 462 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 CAPZA2P47755 286 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 KRTAP10-12P60413 245 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 PSMC6P62333 389 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 SIRPAP78324 504 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 KIR2DS5Q14953 304 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 OTUD3Q5T2D3 398 aaPredicted RBP3.1□□□□□ -1.91
PSPC1-205ENST00000497722 CLEC4GQ6UXB4 293 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 FAM114A1Q8IWE2 563 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 DCUN1D3Q8IWE4 304 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 CFAP206Q8IYR0 622 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 DNAJC22Q8N4W6 341 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 CNBD1Q8NA66 436 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 WDR20Q8TBZ3 569 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 SMPDL3BQ92485 455 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 LPGAT1Q92604 370 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 SLC22A18Q96BI1 424 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 ST6GAL2Q96JF0 529 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 ZNF582Q96NG8 517 aaPredicted RBP3.1□□□□□ -1.91
PSPC1-205ENST00000497722 GCNAQ96QF7 691 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 SLF1Q9BQI6 1058 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 CCDC106Q9BWC9 280 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 MRPL1Q9BYD6 325 aaKnown RBP3.1□□□□□ -1.91
PSPC1-205ENST00000497722 TFB2MQ9H5Q4 396 aaKnown RBP3.1□□□□□ -1.91
PSPC1-205ENST00000497722 OPA3Q9H6K4 179 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 INTS10Q9NVR2 710 aaKnown RBP3.1□□□□□ -1.91
PSPC1-205ENST00000497722 DPP3Q9NY33 737 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 TERF2IPQ9NYB0 399 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 GRIP1Q9Y3R0 1128 aa3.1□□□□□ -1.91
PSPC1-205ENST00000497722 SPIN1Q9Y657 262 aaPredicted RBP3.1□□□□□ -1.91
PSPC1-205ENST00000497722 NOTCH3Q9UM47 2321 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 A0A0G2JLW4 131 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 A0A1W2PP11 408 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 GLOD5A6NK44 160 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms