RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	PTPN2	P17706	415 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	EFNA1	P20827	205 aa	Predicted RBP	10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	UBA1	P22314	1058 aa	Known RBP	10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CBL	P22681	906 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	AKAP5	P24588	427 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	AQP1	P29972	269 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	MATK	P42679	507 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	MAGEA12	P43365	314 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	TKTL1	P51854	596 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	POU6F2	P78424	691 aa	Predicted RBP	10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PPP2R2B	Q00005	443 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	POU4F1	Q01851	419 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	DDR2	Q16832	855 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	TIGD6	Q17RP2	521 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SLC10A6	Q3KNW5	377 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CRY2	Q49AN0	593 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ANKS6	Q68DC2	871 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	RGMB	Q6NW40	437 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PAMR1	Q6UXH9	720 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ZNF438	Q7Z4V0	828 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SPERT	Q8NA61	448 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	METTL6	Q8TCB7	284 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	COPS5	Q92905	334 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	MTFMT	Q96DP5	389 aa	Known RBP	10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	TPD52L3	Q96J77	140 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	LRRC3	Q9BY71	257 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	TRIM54	Q9BYV2	358 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ULBP1	Q9BZM6	244 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	TKTL2	Q9H0I9	626 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	WDCP	Q9H6R7	721 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	NTN4	Q9HB63	628 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PDP1	Q9P0J1	537 aa	Predicted RBP	10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	OR12D3	Q9UGF7	316 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ISPD	A4D126	451 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SNTN	A6NMZ2	147 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	HNRNPCL2	B2RXH8	293 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	OR4F21	O95013	312 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	VIP	P01282	170 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	USP17L7	P0C7H9	530 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	IMPDH1	P20839	514 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	GLUD2	P49448	558 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	GALK2	Q01415	458 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	GHRHR	Q02643	423 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SMARCB1	Q12824	385 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CRY1	Q16526	586 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ZNF678	Q5SXM1	525 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	BLOC1S3	Q6QNY0	202 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SLC44A2	Q8IWA5	706 aa	Predicted RBP	10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	TIGD4	Q8IY51	512 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	DYNC2LI1	Q8TCX1	351 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SH3RF2	Q8TEC5	729 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	KLHL5	Q96PQ7	755 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SMAD5	Q99717	465 aa	Known RBP	10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CXCL16	Q9H2A7	254 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	IGSF5	Q9NSI5	407 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	GALP	Q9UBC7	116 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CACNG4	Q9UBN1	327 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	DNAJB9	Q9UBS3	223 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	RNF6	Q9Y252	685 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PCDHGA10	Q9Y5H3	936 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	MAU2	Q9Y6X3	613 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	LOC105371267	A0A1B0GV96	52 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	BTN3A1	O00481	513 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SERPINA1	P01009	418 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PIGR	P01833	764 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	EPHA2	P29317	976 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ADRA1B	P35368	520 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SOX6	P35712	828 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CLCNKB	P51801	687 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	RPL38	P63173	70 aa	Known RBP	10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	IL18R1	Q13478	541 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	DALRD3	Q5D0E6	543 aa	Known RBP	10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	USP51	Q70EK9	711 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	TTC29	Q8NA56	475 aa	Predicted RBP	10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SETD9	Q8NE22	299 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SLC35F5	Q8WV83	523 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	REXO5	Q96IC2	774 aa	Known RBP	10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SAMHD1	Q9Y3Z3	626 aa	Known RBP	10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PAPPA	Q13219	1627 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CCDC182	A6NF36	153 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SNX4	O95219	450 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	NDST3	O95803	873 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	MMP10	P09238	476 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CTSK	P43235	329 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SLC26A2	P50443	739 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CYP4F8	P98187	520 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ALDH6A1	Q02252	535 aa	Known RBP	10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CDK10	Q15131	360 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	TSN	Q15631	228 aa	Known RBP	10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	BTBD16	Q32M84	506 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	KLHL17	Q6TDP4	642 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CYP4Z1	Q86W10	505 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PROSER1	Q86XN7	944 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ENKUR	Q8TC29	256 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PTER	Q96BW5	349 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	APOL4	Q9BPW4	351 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	UCK2	Q9BZX2	261 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	OPTC	Q9UBM4	332 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	RAPGEFL1	Q9UHV5	662 aa		10.47	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PCDHA9	Q9Y5H5	950 aa		10.47	□□□□□ -0.73

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