RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 MPP5Q8N3R9 675 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 FBXO39Q8N4B4 442 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 CLDN19Q8N6F1 224 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 SNIP1Q8TAD8 396 aaKnown RBP12.11□□□□□ -0.47
MRPL55-233ENST00000495899 HM13Q8TCT9 377 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 PRR11Q96HE9 360 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-233ENST00000495899 NUDT22Q9BRQ3 303 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 B3GNT4Q9C0J1 378 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 SEMA6CQ9H3T2 930 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 THSD1Q9NS62 852 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 SOX13Q9UN79 622 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 KNTC1P50748 2209 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 ASXL3Q9C0F0 2248 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 A0A087WV48 116 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 CCDC188H7C350 402 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 CD3EAPO15446 510 aaKnown RBP12.1□□□□□ -0.47
MRPL55-233ENST00000495899 UBXN7O94888 489 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 FTH1P02794 183 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 ITGA2BP08514 1039 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 SLC35G4P0C7Q5 338 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 OR56A5P0C7T3 313 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 PRSS56P0CW18 603 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 MTHFD1P11586 935 aaKnown RBP12.1□□□□□ -0.47
MRPL55-233ENST00000495899 PBLDP30039 288 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-233ENST00000495899 CD151P48509 253 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 TTPAP49638 278 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 ETF1P62495 437 aaKnown RBP12.1□□□□□ -0.47
MRPL55-233ENST00000495899 CRADDP78560 199 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 PLOD1Q02809 727 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-233ENST00000495899 PTK6Q13882 451 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 ZNF658BQ4V348 819 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-233ENST00000495899 PHF19Q5T6S3 580 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 ANKRD22Q5VYY1 191 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 XKR5Q6UX68 686 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 LYPD8Q6UX82 237 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 PCGF5Q86SE9 256 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 CAND1Q86VP6 1230 aaKnown RBP12.1□□□□□ -0.47
MRPL55-233ENST00000495899 ZNF761Q86XN6 746 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-233ENST00000495899 PLXDC1Q8IUK5 500 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 NAT8LQ8N9F0 302 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 NCSTNQ92542 709 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 CAPZA3Q96KX2 299 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 WWP1Q9H0M0 922 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 DDX47Q9H0S4 455 aaKnown RBP12.1□□□□□ -0.47
MRPL55-233ENST00000495899 ASCL3Q9NQ33 180 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 CATSPERZQ9NTU4 200 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 SYBUQ9NX95 663 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 SAMD15Q9P1V8 674 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 PSMD13Q9UNM6 376 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 RAXQ9Y2V3 346 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 PCDHGA7Q9Y5G6 932 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 HEBP2Q9Y5Z4 205 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 COLEC10Q9Y6Z7 277 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 ZZEF1O43149 2961 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 IGF2RP11717 2491 aa12.1□□□□□ -0.47
MRPL55-233ENST00000495899 ZNF106Q9H2Y7 1883 aaKnown RBP12.09□□□□□ -0.47
MRPL55-233ENST00000495899 FAM237BA0A1B0GVD1 139 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 CDRT15L2A8MXV6 281 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 LIN7AO14910 233 aaPredicted RBP12.09□□□□□ -0.47
MRPL55-233ENST00000495899 TOX3O15405 576 aaPredicted RBP12.09□□□□□ -0.47
MRPL55-233ENST00000495899 RRP8O43159 456 aaKnown RBP12.09□□□□□ -0.47
MRPL55-233ENST00000495899 AVILO75366 819 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 TMEM63AO94886 807 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 TNFSF15O95150 251 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 POLBP06746 335 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 JMJD7P0C870 316 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 THRAP10827 490 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 PAMP19021 973 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 NDUFS1P28331 727 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 NMBRP28336 390 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 CSF2RBP32927 897 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 EIF2S3P41091 472 aaKnown RBP12.09□□□□□ -0.47
MRPL55-233ENST00000495899 PTGIRP43119 386 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 MAGEA3P43357 314 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 PPM1FP49593 454 aaPredicted RBP12.09□□□□□ -0.47
MRPL55-233ENST00000495899 DR1Q01658 176 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 KCNC4Q03721 635 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 GPR18Q14330 331 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 MRNIPQ6NTE8 343 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 KLHL35Q6PF15 583 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 SDCCAG8Q86SQ7 713 aaPredicted RBP12.09□□□□□ -0.47
MRPL55-233ENST00000495899 CLEC14AQ86T13 490 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 HOOK3Q86VS8 718 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 LRRC6Q86X45 466 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 AGBL5Q8NDL9 886 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 NAT14Q8WUY8 206 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 CCDC74BQ96LY2 380 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 SERPINB12Q96P63 405 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 INSM2Q96T92 566 aaPredicted RBP12.09□□□□□ -0.47
MRPL55-233ENST00000495899 TCF12Q99081 682 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 TSSK1BQ9BXA7 367 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 TBC1D10AQ9BXI6 508 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 RAB33BQ9H082 229 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 COG4Q9H9E3 785 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 IMP3Q9NV31 184 aaKnown RBP12.09□□□□□ -0.47
MRPL55-233ENST00000495899 LOXL2Q9Y4K0 774 aa12.09□□□□□ -0.47
MRPL55-233ENST00000495899 IFRD1O00458 451 aaPredicted RBP12.08□□□□□ -0.48
MRPL55-233ENST00000495899 PFDN6O15212 129 aa12.08□□□□□ -0.48
MRPL55-233ENST00000495899 FANCGO15287 622 aa12.08□□□□□ -0.48
MRPL55-233ENST00000495899 NVLO15381 856 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms