RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 SLC6A3Q01959 620 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 DPTQ07507 201 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 MTA1Q13330 715 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 PTPN20Q4JDL3 420 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 PDLIM3Q53GG5 364 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-219ENST00000495172 TMTC4Q5T4D3 741 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 MRPL14Q6P1L8 145 aaKnown RBP8.57□□□□□ -1.04
GARNL3-219ENST00000495172 ARSKQ6UWY0 536 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 TRIM72Q6ZMU5 477 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 ARHGAP36Q6ZRI8 547 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 SLC26A9Q7LBE3 791 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 CD163Q86VB7 1156 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 KMT5CQ86Y97 462 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 P3H2Q8IVL5 708 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 AOPEPQ8N6M6 819 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 AVL9Q8NBF6 648 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 OR11G2Q8NGC1 345 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-219ENST00000495172 NT5C3BQ969T7 300 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 CELF6Q96J87 481 aaKnown RBP8.57□□□□□ -1.04
GARNL3-219ENST00000495172 USP28Q96RU2 1077 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 TRIM51Q9BSJ1 452 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 OR2AG1Q9H205 316 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 SOX17Q9H6I2 414 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-219ENST00000495172 PLEKHF2Q9H8W4 249 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 KLHL1Q9NR64 748 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 POT1Q9NUX5 634 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 EXOC1Q9NV70 894 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 ADGRE2Q9UHX3 823 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 PSMD13Q9UNM6 376 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 ABCA1O95477 2261 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 DNAJC13O75165 2243 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 USF3Q68DE3 2245 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 PVALEFA0A1B0GWK0 134 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 OR5K3A6NET4 321 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 POLR2DO15514 142 aaKnown RBP8.56□□□□□ -1.04
GARNL3-219ENST00000495172 PRAMEF1O95521 474 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 TSPAN12O95859 305 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 CPP00450 1065 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 IFNA2P01563 188 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 ST6GAL1P15907 406 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 POLR2CP19387 275 aaPredicted RBP8.56□□□□□ -1.04
GARNL3-219ENST00000495172 ITGAXP20702 1163 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 MMP11P24347 488 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 PTGER1P34995 402 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 PREPP48147 710 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 CTSCP53634 463 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 ALDH6A1Q02252 535 aaKnown RBP8.56□□□□□ -1.04
GARNL3-219ENST00000495172 PTSQ03393 145 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 GALNT3Q14435 633 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 GRM3Q14832 879 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 POU4F3Q15319 338 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 CAMK4Q16566 473 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 INSCQ1MX18 579 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 TUBB8Q3ZCM7 444 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 RNFT1Q5M7Z0 435 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 ARMC12Q5T9G4 340 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 LRRC66Q68CR7 880 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 LIX1LQ8IVB5 337 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 DTWD1Q8N5C7 304 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 CCDC185Q8N715 623 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 EXD1Q8NHP7 514 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 THAP3Q8WTV1 239 aaPredicted RBP8.56□□□□□ -1.04
GARNL3-219ENST00000495172 CASKIN2Q8WXE0 1202 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 HAS2Q92819 552 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 ZSCAN31Q96LW9 406 aaPredicted RBP8.56□□□□□ -1.04
GARNL3-219ENST00000495172 DEF6Q9H4E7 631 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 FAM13BQ9NYF5 915 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 KIAA1468Q9P260 1216 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 ADGRG1Q9Y653 693 aa8.56□□□□□ -1.04
GARNL3-219ENST00000495172 E7EQ34 232 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 ASNA1O43681 348 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 ACTN4O43707 911 aaKnown RBP8.55□□□□□ -1.04
GARNL3-219ENST00000495172 NUAK1O60285 661 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 MTX2O75431 263 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 RBMXP38159 391 aaKnown RBP8.55□□□□□ -1.04
GARNL3-219ENST00000495172 KIR2DL3P43628 341 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 NUP107P57740 925 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 POLR2LP62875 67 aaKnown RBP8.55□□□□□ -1.04
GARNL3-219ENST00000495172 CACNG1Q06432 222 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 PMPCAQ10713 525 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 TRAF2Q12933 501 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 CDO1Q16878 200 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 C15orf59Q2T9L4 293 aaPredicted RBP8.55□□□□□ -1.04
GARNL3-219ENST00000495172 SLC25A52Q3SY17 297 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 NKAIN1Q4KMZ8 207 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 FBXW10Q5XX13 1052 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 HIBCHQ6NVY1 386 aaPredicted RBP8.55□□□□□ -1.04
GARNL3-219ENST00000495172 SHC4Q6S5L8 630 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 NAPRTQ6XQN6 538 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 CDHR3Q6ZTQ4 885 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 CENPQQ7L2Z9 268 aaPredicted RBP8.55□□□□□ -1.04
GARNL3-219ENST00000495172 BRAPQ7Z569 592 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 YTHDF3Q7Z739 585 aaKnown RBP8.55□□□□□ -1.04
GARNL3-219ENST00000495172 SIAH3Q8IW03 269 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 PRSS58Q8IYP2 241 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 CLYBLQ8N0X4 340 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 EMC1Q8N766 993 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 ASB5Q8WWX0 329 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 TBC1D31Q96DN5 1066 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms