RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 ESAMQ96AP7 390 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 SLC47A1Q96FL8 570 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 VNN3Q9NY84 501 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 OSGIN1Q9UJX0 560 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 SNX5Q9Y5X3 404 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 SMIM35A0A1B0GVV1 85 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 NPEPPSL1A6NEC2 478 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 TGFBR2P37173 567 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 HTR6P50406 440 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 CLCNKBP51801 687 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 ERVPABLB-1P60509 514 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 NRG1Q02297 640 aaPredicted RBP15.14■□□□□ 0.01
SDF4-207ENST00000494748 FAM171BQ6P995 826 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 SPESP1Q6UW49 350 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 DPP9Q86TI2 863 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 LRRC49Q8IUZ0 686 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 UMODL1-AS1Q8N2C9 162 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 HOXD1Q9GZZ0 328 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 SUN2Q9UH99 717 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 OR4F21O95013 312 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 KCNK2O95069 426 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 HOXB8P17481 243 aaPredicted RBP15.13■□□□□ 0.01
SDF4-207ENST00000494748 GRIK1P39086 918 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 LETMD1Q6P1Q0 360 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 LACC1Q8IV20 430 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 LGI2Q8N0V4 545 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 ZCCHC7Q8N3Z6 543 aaKnown RBP15.13■□□□□ 0.01
SDF4-207ENST00000494748 OR52B6Q8NGF0 335 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 OR52E4Q8NGH9 312 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 MCOLN3Q8TDD5 553 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 FIG4Q92562 907 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 TXNDC15Q96J42 360 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 UGT2B28Q9BY64 529 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 EHD1Q9H4M9 534 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 SLC25A37Q9NYZ2 338 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 CRCPO75575 148 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 SMIM10L2AP0DMW4 78 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 SMIM10L2BP0DMW5 78 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 ITGAMP11215 1152 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 RENBPP51606 427 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 ADAM17P78536 824 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 DGUOKQ16854 277 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 SCD5Q86SK9 330 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 LYSMD2Q8IV50 215 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 RHOXF1Q8NHV9 184 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 DNAJB3Q8WWF6 145 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 CDK15Q96Q40 435 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 PAAF1Q9BRP4 392 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 ACTR8Q9H981 624 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 PRDM5Q9NQX1 630 aaPredicted RBP15.13■□□□□ 0.01
SDF4-207ENST00000494748 NOX1Q9Y5S8 564 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 NCF1BA6NI72 391 aaPredicted RBP15.13■□□□□ 0.01
SDF4-207ENST00000494748 NCF1CA8MVU1 366 aaPredicted RBP15.13■□□□□ 0.01
SDF4-207ENST00000494748 LSM1O15116 133 aaKnown RBP15.13■□□□□ 0.01
SDF4-207ENST00000494748 MITFO75030 526 aaPredicted RBP15.13■□□□□ 0.01
SDF4-207ENST00000494748 NCF1P14598 390 aaPredicted RBP15.13■□□□□ 0.01
SDF4-207ENST00000494748 LRIT3Q3SXY7 679 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 ZC3H12BQ5HYM0 836 aaKnown RBP15.13■□□□□ 0.01
SDF4-207ENST00000494748 ATAD3BQ5T9A4 648 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 CYP20A1Q6UW02 462 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 PLPP6Q8IY26 295 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 C10orf111Q8N326 155 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 RPL3LQ92901 407 aaKnown RBP15.13■□□□□ 0.01
SDF4-207ENST00000494748 BARD1Q99728 777 aaKnown RBP15.13■□□□□ 0.01
SDF4-207ENST00000494748 ADGRE2Q9UHX3 823 aa15.13■□□□□ 0.01
SDF4-207ENST00000494748 FAM47E-STBD1D6RA91 191 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 RPP40O75818 363 aaKnown RBP15.12■□□□□ 0.01
SDF4-207ENST00000494748 OGNP20774 298 aaKnown RBP15.12■□□□□ 0.01
SDF4-207ENST00000494748 SLC13A2Q13183 592 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 DALRD3Q5D0E6 543 aaKnown RBP15.12■□□□□ 0.01
SDF4-207ENST00000494748 FKBP9P1Q75LS8 142 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 ARMC8Q8IUR7 673 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 OR2T12Q8NG77 320 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 DSN1Q9H410 356 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 CATSPERZQ9NTU4 200 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 MIOSQ9NXC5 875 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.12■□□□□ 0.01
SDF4-207ENST00000494748 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.12■□□□□ 0.01
SDF4-207ENST00000494748 FAM50BQ9Y247 325 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 PCDHB14Q9Y5E9 798 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 RRN3P2A6NIE6 340 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 MUSKO15146 869 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 HS6ST1O60243 411 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 PRKD3O94806 890 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 ALDH7A1P49419 539 aaKnown RBP15.12■□□□□ 0.01
SDF4-207ENST00000494748 PPP5CP53041 499 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 ITKQ08881 620 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 IL18R1Q13478 541 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 MAPK11Q15759 364 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 KIAA1958Q8N8K9 716 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 Q8N9G6 341 aaPredicted RBP15.12■□□□□ 0.01
SDF4-207ENST00000494748 OR5K1Q8NHB7 308 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 PEX13Q92968 403 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 GLMNQ92990 594 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 PSMG2Q969U7 264 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 NSMCE3Q96MG7 304 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 SIGLEC11Q96RL6 698 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 CCDC90BQ9GZT6 254 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 SP140LQ9H930 580 aa15.12■□□□□ 0.01
SDF4-207ENST00000494748 EIF2B4Q9UI10 523 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms