RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 CPNE7Q9UBL6 633 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 FBXO5Q9UKT4 447 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 NFU1Q9UMS0 254 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 PSAT1Q9Y617 370 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 A0A1W2PQM1 296 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 PRR19A6NJB7 356 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 VIPP01282 170 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 FTH1P02794 183 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 CHRM3P20309 590 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 OGNP20774 298 aaKnown RBP10.89□□□□□ -0.67
APTX-230ENST00000494649 GABRB3P28472 473 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 ECHS1P30084 290 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 HALP42357 657 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 MAGEA4P43358 317 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 GPX6P59796 221 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 INSM1Q01101 510 aaPredicted RBP10.89□□□□□ -0.67
APTX-230ENST00000494649 FOXK2Q01167 660 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 CUL1Q13616 776 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 HES3Q5TGS1 186 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 CFAP61Q8NHU2 1237 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 GSDMBQ8TAX9 411 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 SKA2Q8WVK7 121 aaPredicted RBP10.89□□□□□ -0.67
APTX-230ENST00000494649 SEC14L1Q92503 715 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 LRRC39Q96DD0 335 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 MRRFQ96E11 262 aaKnown RBP10.89□□□□□ -0.67
APTX-230ENST00000494649 LINC00615Q96LM1 132 aaPredicted RBP10.89□□□□□ -0.67
APTX-230ENST00000494649 RMDN2Q96LZ7 410 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 SLC38A3Q99624 504 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 NAT9Q9BTE0 207 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 VPS37BQ9H9H4 285 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 SMYD2Q9NRG4 433 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 FAM114A2Q9NRY5 505 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 GNPTGQ9UJJ9 305 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 KLK13Q9UKR3 277 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 FRYQ5TBA9 3013 aa10.89□□□□□ -0.67
APTX-230ENST00000494649 KRT87PA6NCN2 255 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 NDC80O14777 642 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 NUDT21O43809 227 aaKnown RBP10.88□□□□□ -0.67
APTX-230ENST00000494649 AP2A2O94973 939 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 TYRP1P17643 537 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 SAT1P21673 171 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 CAV1Q03135 178 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 DMPKQ09013 629 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 PRKG2Q13237 762 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 EFTUD2Q15029 972 aaKnown RBP eCLIP10.88□□□□□ -0.67
APTX-230ENST00000494649 RPE65Q16518 533 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 GLE1Q53GS7 698 aaKnown RBP10.88□□□□□ -0.67
APTX-230ENST00000494649 RBM20Q5T481 1227 aaKnown RBP10.88□□□□□ -0.67
APTX-230ENST00000494649 TEDDM1Q5T9Z0 273 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 ZNF549Q6P9A3 640 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 ABRAXAS1Q6UWZ7 409 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 C3orf62Q6ZUJ4 267 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 TMPRSS9Q7Z410 1059 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 SPRED1Q7Z699 444 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 SLC9B2Q86UD5 537 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 CCNJLQ8IV13 435 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 SIDT2Q8NBJ9 832 aaKnown RBP10.88□□□□□ -0.67
APTX-230ENST00000494649 UHMK1Q8TAS1 419 aaKnown RBP10.88□□□□□ -0.67
APTX-230ENST00000494649 NAT6Q93015 286 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 SLC30A3Q99726 388 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 FAM167BQ9BTA0 163 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 SCNM1Q9BWG6 230 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 KCNK4Q9NYG8 393 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 NCKIPSDQ9NZQ3 722 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 ZFATQ9P243 1243 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 DNMT3AQ9Y6K1 912 aaPredicted RBP10.88□□□□□ -0.67
APTX-230ENST00000494649 TCRBV9S1A1TA0A576 114 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 CXorf49A8MYA2 514 aaPredicted RBP10.88□□□□□ -0.67
APTX-230ENST00000494649 E5RI56 91 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 B4GAT1O43505 415 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 OPA1O60313 960 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 AHSGP02765 367 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 GPR18Q14330 331 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 KRT33BQ14525 404 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 KYNUQ16719 465 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 ZNF658BQ4V348 819 aaPredicted RBP10.88□□□□□ -0.67
APTX-230ENST00000494649 RNF187Q5TA31 235 aaPredicted RBP10.88□□□□□ -0.67
APTX-230ENST00000494649 STEAP4Q687X5 459 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 OTOAQ7RTW8 1153 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 PIM3Q86V86 326 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 C17orf82Q86X59 251 aaPredicted RBP10.88□□□□□ -0.67
APTX-230ENST00000494649 GPATCH11Q8N954 259 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 C2CD4AQ8NCU7 369 aaPredicted RBP10.88□□□□□ -0.67
APTX-230ENST00000494649 CALML6Q8TD86 181 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 TMEM159Q96B96 161 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 FMO2Q99518 471 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 NUDT22Q9BRQ3 303 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 OR52A5Q9H2C5 316 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 LRRC4CQ9HCJ2 640 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 EVA1BQ9NVM1 165 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 TMEM9Q9P0T7 183 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 KLHL3Q9UH77 587 aa10.88□□□□□ -0.67
APTX-230ENST00000494649 KIR2DS5A0A0G2JLQ3 304 aa10.87□□□□□ -0.67
APTX-230ENST00000494649 A0A0G2JNG1 304 aa10.87□□□□□ -0.67
APTX-230ENST00000494649 KIR2DS3K7RE56 304 aa10.87□□□□□ -0.67
APTX-230ENST00000494649 PFDN6O15212 129 aa10.87□□□□□ -0.67
APTX-230ENST00000494649 PKMP14618 531 aaKnown RBP10.87□□□□□ -0.67
APTX-230ENST00000494649 JUPP14923 745 aa10.87□□□□□ -0.67
APTX-230ENST00000494649 UBE2IP63279 158 aaKnown RBP10.87□□□□□ -0.67
APTX-230ENST00000494649 ABRQ12979 859 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms