RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 DRG1Q9Y295 367 aaKnown RBP32.46■■■□□ 2.79
CBX4-203ENST00000494546 ZKSCAN5Q9Y2L8 839 aa32.46■■■□□ 2.79
CBX4-203ENST00000494546 HEATR9A2RTY3 570 aa32.45■■■□□ 2.79
CBX4-203ENST00000494546 ERVH48-1M5A8F1 160 aa32.45■■■□□ 2.79
CBX4-203ENST00000494546 TOX3O15405 576 aaPredicted RBP32.45■■■□□ 2.79
CBX4-203ENST00000494546 KIF1CO43896 1103 aaKnown RBP32.45■■■□□ 2.79
CBX4-203ENST00000494546 CACHD1Q5VU97 1274 aa32.45■■■□□ 2.79
CBX4-203ENST00000494546 KLHL35Q6PF15 583 aa32.45■■■□□ 2.79
CBX4-203ENST00000494546 CLDN19Q8N6F1 224 aa32.45■■■□□ 2.79
CBX4-203ENST00000494546 NKD1Q969G9 470 aa32.45■■■□□ 2.79
CBX4-203ENST00000494546 CCM2Q9BSQ5 444 aa32.45■■■□□ 2.79
CBX4-203ENST00000494546 VPS37BQ9H9H4 285 aa32.45■■■□□ 2.79
CBX4-203ENST00000494546 CASS4Q9NQ75 786 aa32.45■■■□□ 2.79
CBX4-203ENST00000494546 SMARCAL1Q9NZC9 954 aa32.45■■■□□ 2.79
CBX4-203ENST00000494546 EPHA6Q9UF33 1036 aa32.45■■■□□ 2.79
CBX4-203ENST00000494546 SDK2Q58EX2 2172 aa32.44■■■□□ 2.78
CBX4-203ENST00000494546 C17orf113A0A1B0GUU1 675 aa32.44■■■□□ 2.78
CBX4-203ENST00000494546 CCDC162PA2VCL2 907 aa32.44■■■□□ 2.78
CBX4-203ENST00000494546 POLR1CO15160 346 aaPredicted RBP32.44■■■□□ 2.78
CBX4-203ENST00000494546 PSMA3P25788 255 aa32.44■■■□□ 2.78
CBX4-203ENST00000494546 PPP1CAP62136 330 aa32.44■■■□□ 2.78
CBX4-203ENST00000494546 FOXM1Q08050 763 aa32.44■■■□□ 2.78
CBX4-203ENST00000494546 LAMB3Q13751 1172 aa32.44■■■□□ 2.78
CBX4-203ENST00000494546 COG4Q9H9E3 785 aa32.44■■■□□ 2.78
CBX4-203ENST00000494546 SIDT1Q9NXL6 827 aaKnown RBP32.44■■■□□ 2.78
CBX4-203ENST00000494546 ADRA1DP25100 572 aa32.43■■■□□ 2.78
CBX4-203ENST00000494546 KCNJ1P48048 391 aa32.43■■■□□ 2.78
CBX4-203ENST00000494546 KRT33BQ14525 404 aa32.43■■■□□ 2.78
CBX4-203ENST00000494546 CAPRIN2Q6IMN6 1127 aaKnown RBP32.43■■■□□ 2.78
CBX4-203ENST00000494546 PRSS42Q7Z5A4 293 aa32.43■■■□□ 2.78
CBX4-203ENST00000494546 IL22RA1Q8N6P7 574 aa32.43■■■□□ 2.78
CBX4-203ENST00000494546 OR13J1Q8NGT2 312 aa32.43■■■□□ 2.78
CBX4-203ENST00000494546 HDAC10Q969S8 669 aa32.43■■■□□ 2.78
CBX4-203ENST00000494546 RANBP9Q96S59 729 aa32.43■■■□□ 2.78
CBX4-203ENST00000494546 ZPBPQ9BS86 351 aa32.43■■■□□ 2.78
CBX4-203ENST00000494546 RAB33BQ9H082 229 aa32.43■■■□□ 2.78
CBX4-203ENST00000494546 ZNF768Q9H5H4 540 aaKnown RBP32.43■■■□□ 2.78
CBX4-203ENST00000494546 SLC2A6Q9UGQ3 507 aa32.43■■■□□ 2.78
CBX4-203ENST00000494546 RAD1O60671 282 aa32.42■■■□□ 2.78
CBX4-203ENST00000494546 FOXN2P32314 431 aa32.42■■■□□ 2.78
CBX4-203ENST00000494546 TSTD2Q5T7W7 516 aa32.42■■■□□ 2.78
CBX4-203ENST00000494546 PCSK4Q6UW60 755 aa32.42■■■□□ 2.78
CBX4-203ENST00000494546 COLEC10Q9Y6Z7 277 aa32.42■■■□□ 2.78
CBX4-203ENST00000494546 AP2A2O94973 939 aa32.41■■■□□ 2.78
CBX4-203ENST00000494546 PRB1P04280 392 aa32.41■■■□□ 2.78
CBX4-203ENST00000494546 SH3BP2P78314 561 aa32.41■■■□□ 2.78
CBX4-203ENST00000494546 BASP1P80723 227 aaKnown RBP32.41■■■□□ 2.78
CBX4-203ENST00000494546 CACNA2D3Q8IZS8 1091 aa32.41■■■□□ 2.78
CBX4-203ENST00000494546 ZSCAN1Q8NBB4 408 aa32.41■■■□□ 2.78
CBX4-203ENST00000494546 LSM14AQ8ND56 463 aaKnown RBP32.41■■■□□ 2.78
CBX4-203ENST00000494546 ZFPM2Q8WW38 1151 aa32.41■■■□□ 2.78
CBX4-203ENST00000494546 TBRG4Q969Z0 631 aaKnown RBP eCLIP32.41■■■□□ 2.78
CBX4-203ENST00000494546 ZNF778Q96MU6 729 aa32.41■■■□□ 2.78
CBX4-203ENST00000494546 KIR3DX1Q9H7L2 352 aa32.41■■■□□ 2.78
CBX4-203ENST00000494546 SLC24A2Q9UI40 661 aa32.41■■■□□ 2.78
CBX4-203ENST00000494546 TCAF1Q9Y4C2 921 aa32.41■■■□□ 2.78
CBX4-203ENST00000494546 MGAQ8IWI9 3026 aa32.4■■■□□ 2.78
CBX4-203ENST00000494546 TK2O00142 265 aa32.4■■■□□ 2.78
CBX4-203ENST00000494546 GOT2P00505 430 aaKnown RBP32.4■■■□□ 2.78
CBX4-203ENST00000494546 WT1P19544 449 aaPredicted RBP32.4■■■□□ 2.78
CBX4-203ENST00000494546 NSG1P42857 185 aa32.4■■■□□ 2.78
CBX4-203ENST00000494546 ITIH4Q14624 930 aa32.4■■■□□ 2.78
CBX4-203ENST00000494546 AFTPHQ6ULP2 937 aa32.4■■■□□ 2.78
CBX4-203ENST00000494546 C4orf22Q6V702 233 aa32.4■■■□□ 2.78
CBX4-203ENST00000494546 TTC9Q92623 222 aa32.4■■■□□ 2.78
CBX4-203ENST00000494546 HRASLS2Q9NWW9 162 aa32.4■■■□□ 2.78
CBX4-203ENST00000494546 PILRAQ9UKJ1 303 aa32.4■■■□□ 2.78
CBX4-203ENST00000494546 RIMKLBQ9ULI2 386 aa32.4■■■□□ 2.78
CBX4-203ENST00000494546 PCDHGA4Q9Y5G9 962 aa32.4■■■□□ 2.78
CBX4-203ENST00000494546 HEBP2Q9Y5Z4 205 aa32.4■■■□□ 2.78
CBX4-203ENST00000494546 PRSS21Q9Y6M0 314 aa32.4■■■□□ 2.78
CBX4-203ENST00000494546 OR5K3A6NET4 321 aa32.39■■■□□ 2.78
CBX4-203ENST00000494546 KCTD19Q17RG1 926 aaPredicted RBP32.39■■■□□ 2.78
CBX4-203ENST00000494546 ZNF449Q6P9G9 518 aa32.39■■■□□ 2.78
CBX4-203ENST00000494546 OOSP2Q86WS3 158 aa32.39■■■□□ 2.78
CBX4-203ENST00000494546 PPHLN1Q8NEY8 458 aaKnown RBP32.39■■■□□ 2.78
CBX4-203ENST00000494546 OR6P1Q8NGX9 317 aa32.39■■■□□ 2.78
CBX4-203ENST00000494546 KLHL6Q8WZ60 621 aa32.39■■■□□ 2.78
CBX4-203ENST00000494546 OR6C1Q96RD1 312 aa32.39■■■□□ 2.78
CBX4-203ENST00000494546 FERD3LQ96RJ6 166 aa32.39■■■□□ 2.78
CBX4-203ENST00000494546 OR52A5Q9H2C5 316 aa32.39■■■□□ 2.78
CBX4-203ENST00000494546 EIF2B3Q9NR50 452 aaKnown RBP32.39■■■□□ 2.78
CBX4-203ENST00000494546 HOMER3Q9NSC5 361 aa32.39■■■□□ 2.78
CBX4-203ENST00000494546 GOLGA6L3A6NEY3 463 aa32.38■■■□□ 2.77
CBX4-203ENST00000494546 IFRD1O00458 451 aaPredicted RBP32.38■■■□□ 2.77
CBX4-203ENST00000494546 STK17BO94768 372 aa32.38■■■□□ 2.77
CBX4-203ENST00000494546 NDUFS1P28331 727 aa32.38■■■□□ 2.77
CBX4-203ENST00000494546 PDHA2P29803 388 aa32.38■■■□□ 2.77
CBX4-203ENST00000494546 PREPP48147 710 aa32.38■■■□□ 2.77
CBX4-203ENST00000494546 SESN2P58004 480 aaPredicted RBP32.38■■■□□ 2.77
CBX4-203ENST00000494546 ZNF658BQ4V348 819 aaPredicted RBP32.38■■■□□ 2.77
CBX4-203ENST00000494546 DNTTIP2Q5QJE6 756 aaKnown RBP32.38■■■□□ 2.77
CBX4-203ENST00000494546 ARMC6Q6NXE6 501 aa32.38■■■□□ 2.77
CBX4-203ENST00000494546 NLRP9Q7RTR0 991 aa32.38■■■□□ 2.77
CBX4-203ENST00000494546 PRELID2Q8N945 189 aa32.38■■■□□ 2.77
CBX4-203ENST00000494546 RNF31Q96EP0 1072 aa32.38■■■□□ 2.77
CBX4-203ENST00000494546 ELMO2Q96JJ3 720 aa32.38■■■□□ 2.77
CBX4-203ENST00000494546 SPRY4Q9C004 299 aa32.38■■■□□ 2.77
CBX4-203ENST00000494546 OR6C74A6NCV1 312 aa32.37■■■□□ 2.77
CBX4-203ENST00000494546 PRAMEP78395 509 aa32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms