RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 GFERP55789 205 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 PRAMEP78395 509 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 GPS1Q13098 491 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 CLN3Q13286 438 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 KCNJ11Q14654 390 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 TRIP13Q15645 432 aaPredicted RBP22.12■■□□□ 1.13
SNIP1-203ENST00000493916 SNAP47Q5SQN1 464 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 BROXQ5VW32 411 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 CCDC137Q6PK04 289 aaKnown RBP22.12■■□□□ 1.13
SNIP1-203ENST00000493916 PDZD3Q86UT5 571 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 LILRA3Q8N6C8 439 aaPredicted RBP22.12■■□□□ 1.13
SNIP1-203ENST00000493916 BMPERQ8N8U9 685 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 RSC1A1Q92681 617 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 CRELD1Q96HD1 420 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 TTC1Q99614 292 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 DDA1Q9BW61 102 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 RAB33BQ9H082 229 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 CHRAC1Q9NRG0 131 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 FOXJ2Q9P0K8 574 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 EPHA6Q9UF33 1036 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 NEU2Q9Y3R4 380 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 HEBP2Q9Y5Z4 205 aa22.12■■□□□ 1.13
SNIP1-203ENST00000493916 GOLGA6L10A0A0M3HER8 536 aa22.11■■□□□ 1.13
SNIP1-203ENST00000493916 TOX3O15405 576 aaPredicted RBP22.11■■□□□ 1.13
SNIP1-203ENST00000493916 PHF2O75151 1096 aa22.11■■□□□ 1.13
SNIP1-203ENST00000493916 FNTAP49354 379 aa22.11■■□□□ 1.13
SNIP1-203ENST00000493916 RPA4Q13156 261 aa22.11■■□□□ 1.13
SNIP1-203ENST00000493916 ARMC3Q5W041 872 aa22.11■■□□□ 1.13
SNIP1-203ENST00000493916 SPDYE1Q8NFV5 336 aaPredicted RBP22.11■■□□□ 1.13
SNIP1-203ENST00000493916 OR6P1Q8NGX9 317 aa22.11■■□□□ 1.13
SNIP1-203ENST00000493916 C9orf72Q96LT7 481 aa22.11■■□□□ 1.13
SNIP1-203ENST00000493916 OR52A5Q9H2C5 316 aa22.11■■□□□ 1.13
SNIP1-203ENST00000493916 PRORYQ9H606 182 aa22.11■■□□□ 1.13
SNIP1-203ENST00000493916 MRM3Q9HC36 420 aaKnown RBP22.11■■□□□ 1.13
SNIP1-203ENST00000493916 TREX1Q9NSU2 369 aa22.11■■□□□ 1.13
SNIP1-203ENST00000493916 OCIAD1Q9NX40 245 aa22.11■■□□□ 1.13
SNIP1-203ENST00000493916 CFAP20Q9Y6A4 193 aaKnown RBP22.11■■□□□ 1.13
SNIP1-203ENST00000493916 ZFYVE26Q68DK2 2539 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 TCRBV7S3A2A0A539 114 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 EFCAB7A8K855 629 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 A8MU76 341 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 CAPN5O15484 640 aaPredicted RBP22.1■■□□□ 1.13
SNIP1-203ENST00000493916 POLBP06746 335 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 LIPCP11150 499 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 TCP1P17987 556 aaKnown RBP22.1■■□□□ 1.13
SNIP1-203ENST00000493916 VPS41P49754 854 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 RAB15P59190 212 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 CRADDP78560 199 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 SARNPP82979 210 aaKnown RBP22.1■■□□□ 1.13
SNIP1-203ENST00000493916 KCTD19Q17RG1 926 aaPredicted RBP22.1■■□□□ 1.13
SNIP1-203ENST00000493916 AARS2Q5JTZ9 985 aaKnown RBP22.1■■□□□ 1.13
SNIP1-203ENST00000493916 DUS1LQ6P1R4 473 aaKnown RBP22.1■■□□□ 1.13
SNIP1-203ENST00000493916 KLHL35Q6PF15 583 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 PRSS42Q7Z5A4 293 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 FAM129CQ86XR2 697 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 GRK7Q8WTQ7 553 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 TGM7Q96PF1 710 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 KIFC1Q9BW19 673 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 KIR3DX1Q9H7L2 352 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.1■■□□□ 1.13
SNIP1-203ENST00000493916 KLHL3Q9UH77 587 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 PRSS21Q9Y6M0 314 aa22.1■■□□□ 1.13
SNIP1-203ENST00000493916 FAM208BQ5VWN6 2430 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.09■■□□□ 1.13
SNIP1-203ENST00000493916 ZNF185O15231 689 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 FTH1P02794 183 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 MGAT1P26572 445 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 NDUFS1P28331 727 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 PPARGP37231 505 aaPredicted RBP22.09■■□□□ 1.13
SNIP1-203ENST00000493916 CD151P48509 253 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 TMPRSS3P57727 454 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 PLCL1Q15111 1095 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 FASTKD1Q53R41 847 aaKnown RBP22.09■■□□□ 1.13
SNIP1-203ENST00000493916 ZNF449Q6P9G9 518 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 ART4Q93070 314 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 PMEPA1Q969W9 287 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 ZDHHC12Q96GR4 267 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 ASPSCR1Q9BZE9 553 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 ZNF768Q9H5H4 540 aaKnown RBP22.09■■□□□ 1.13
SNIP1-203ENST00000493916 SYBUQ9NX95 663 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 SLC39A1Q9NY26 324 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 SLC24A2Q9UI40 661 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 PYCARDQ9ULZ3 195 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 COLEC10Q9Y6Z7 277 aa22.09■■□□□ 1.13
SNIP1-203ENST00000493916 F8W8V4 182 aa22.08■■□□□ 1.13
SNIP1-203ENST00000493916 LIN7AO14910 233 aaPredicted RBP22.08■■□□□ 1.13
SNIP1-203ENST00000493916 OR56A5P0C7T3 313 aa22.08■■□□□ 1.13
SNIP1-203ENST00000493916 LEPRP48357 1165 aaKnown RBP22.08■■□□□ 1.13
SNIP1-203ENST00000493916 MC2RQ01718 297 aa22.08■■□□□ 1.13
SNIP1-203ENST00000493916 SEMA3AQ14563 771 aa22.08■■□□□ 1.13
SNIP1-203ENST00000493916 GSE1Q14687 1217 aa22.08■■□□□ 1.13
SNIP1-203ENST00000493916 ANKRD22Q5VYY1 191 aa22.08■■□□□ 1.13
SNIP1-203ENST00000493916 CPT1BQ92523 772 aa22.08■■□□□ 1.13
SNIP1-203ENST00000493916 TEFMQ96QE5 360 aaKnown RBP22.08■■□□□ 1.13
SNIP1-203ENST00000493916 CATSPERZQ9NTU4 200 aa22.08■■□□□ 1.13
SNIP1-203ENST00000493916 SIDT1Q9NXL6 827 aaKnown RBP22.08■■□□□ 1.13
SNIP1-203ENST00000493916 LOC400499M0QZD8 3231 aa22.07■■□□□ 1.12
SNIP1-203ENST00000493916 IFRD1O00458 451 aaPredicted RBP22.07■■□□□ 1.12
SNIP1-203ENST00000493916 OR1I1O60431 355 aa22.07■■□□□ 1.12
SNIP1-203ENST00000493916 TMEM63AO94886 807 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms