RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 APOBEC1P41238 236 aaKnown RBP3.68□□□□□ -1.82
SMC4-223ENST00000493695 ARF3P61204 181 aaPredicted RBP3.68□□□□□ -1.82
SMC4-223ENST00000493695 ARF1P84077 181 aaKnown RBP3.68□□□□□ -1.82
SMC4-223ENST00000493695 PPARDQ03181 441 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 LMOD3Q0VAK6 560 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 CDC16Q13042 620 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 MED22Q15528 200 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 TCTEX1D4Q5JR98 221 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 CFAP161Q6P656 301 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 TMED8Q6PL24 325 aaPredicted RBP3.68□□□□□ -1.82
SMC4-223ENST00000493695 IKBIPQ70UQ0 350 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 DPPA4Q7L190 304 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 FASTKD5Q7L8L6 764 aaKnown RBP3.68□□□□□ -1.82
SMC4-223ENST00000493695 TSPAN33Q86UF1 283 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 RPAP2Q8IXW5 612 aaPredicted RBP3.68□□□□□ -1.82
SMC4-223ENST00000493695 IGSF8Q969P0 613 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 NSUN4Q96CB9 384 aaKnown RBP3.68□□□□□ -1.82
SMC4-223ENST00000493695 GHITMQ9H3K2 345 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 DNAJB4Q9UDY4 337 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 OR14J1Q9UGF5 321 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 CORO1CQ9ULV4 474 aaPredicted RBP3.68□□□□□ -1.82
SMC4-223ENST00000493695 LAS1LQ9Y4W2 734 aaKnown RBP3.68□□□□□ -1.82
SMC4-223ENST00000493695 ARHGEF40Q8TER5 1519 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 FSD2A1L4K1 749 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 C5orf60A6NFR6 353 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 CDRT15L2A8MXV6 281 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 PRR32B1ATL7 298 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 SRSF10O75494 262 aaKnown RBP3.67□□□□□ -1.82
SMC4-223ENST00000493695 BMP10O95393 424 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 DNAH10OSP0CZ25 163 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 RARGP13631 454 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 NFKBIAP25963 317 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 GARSP41250 739 aaKnown RBP3.67□□□□□ -1.82
SMC4-223ENST00000493695 CLNS1AP54105 237 aaKnown RBP3.67□□□□□ -1.82
SMC4-223ENST00000493695 F2RL1P55085 397 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 PRAMEP78395 509 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 PDE1CQ14123 709 aaPredicted RBP3.67□□□□□ -1.82
SMC4-223ENST00000493695 FRG1Q14331 258 aaKnown RBP3.67□□□□□ -1.82
SMC4-223ENST00000493695 ADIPOQQ15848 244 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 CDONQ4KMG0 1287 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 NDUFAF5Q5TEU4 345 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 ZNF613Q6PF04 617 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 PAPD4Q6PIY7 484 aaKnown RBP3.67□□□□□ -1.82
SMC4-223ENST00000493695 GLDNQ6ZMI3 551 aaPredicted RBP3.67□□□□□ -1.82
SMC4-223ENST00000493695 ISCA2Q86U28 154 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 CDC20BQ86Y33 519 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 RNF168Q8IYW5 571 aaPredicted RBP3.67□□□□□ -1.82
SMC4-223ENST00000493695 SCML4Q8N228 414 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 WDTC1Q8N5D0 677 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 SCFD2Q8WU76 684 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 C1orf74Q96LT6 269 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 BARD1Q99728 777 aaKnown RBP3.67□□□□□ -1.82
SMC4-223ENST00000493695 ADAMTS9Q9P2N4 1935 aa3.67□□□□□ -1.82
SMC4-223ENST00000493695 RSF1Q96T23 1441 aaPredicted RBP3.67□□□□□ -1.82
SMC4-223ENST00000493695 A6NCN8 305 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 DAB1O75553 588 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 NKX2-2O95096 273 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 KCNK5O95279 499 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 NGFP01138 241 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 BDNFP23560 247 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 ACADLP28330 430 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 HADHAP40939 763 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 NAP1L1P55209 391 aaKnown RBP3.66□□□□□ -1.82
SMC4-223ENST00000493695 KRTAP10-8P60410 259 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 ZBED6P86452 979 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 GOLGA8DPQ0D2H9 430 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 AIMP2Q13155 320 aaKnown RBP3.66□□□□□ -1.82
SMC4-223ENST00000493695 PRKG2Q13237 762 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 GRAPQ13588 217 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 HNRNPDQ14103 355 aaKnown RBP3.66□□□□□ -1.82
SMC4-223ENST00000493695 ASTE1Q2TB18 679 aaPredicted RBP3.66□□□□□ -1.82
SMC4-223ENST00000493695 PCGF3Q3KNV8 242 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 DUSP28Q4G0W2 176 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 KLHL35Q6PF15 583 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 Q6ZSR9 355 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 SEPT14Q6ZU15 432 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 HACE1Q8IYU2 909 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 ADGRF2Q8IZF7 708 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 TTC39CQ8N584 583 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 OR14L1PQ8NHC6 308 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 POMGNT1Q8WZA1 660 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 PGAM5Q96HS1 289 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 RSRC1Q96IZ7 334 aaKnown RBP3.66□□□□□ -1.82
SMC4-223ENST00000493695 MAGED4Q96JG8 741 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 OR2A14Q96R47 310 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 SEMA3CQ99985 751 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 PIGQQ9BRB3 760 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 FGFBP2Q9BYJ0 223 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 RANGRFQ9HD47 186 aaPredicted RBP3.66□□□□□ -1.82
SMC4-223ENST00000493695 EIF2B3Q9NR50 452 aaKnown RBP3.66□□□□□ -1.82
SMC4-223ENST00000493695 NSMCE4AQ9NXX6 385 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 STK39Q9UEW8 545 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 PCNX3Q9H6A9 2034 aa3.66□□□□□ -1.82
SMC4-223ENST00000493695 PRAG1Q86YV5 1406 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 A0A087WW49 117 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 EIF4E1BA6NMX2 242 aaKnown RBP3.65□□□□□ -1.83
SMC4-223ENST00000493695 MYO1GB0I1T2 1018 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 SLC22A2O15244 555 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 NDUFS3O75489 264 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms