RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 PCDHGB7Q9Y5F8 929 aa6.89□□□□□ -1.31
CAB39-206ENST00000493540 PCDHGA9Q9Y5G4 932 aaKnown RBP6.89□□□□□ -1.31
CAB39-206ENST00000493540 SLC30A1Q9Y6M5 507 aa6.89□□□□□ -1.31
CAB39-206ENST00000493540 RPS6KL1Q9Y6S9 549 aa6.89□□□□□ -1.31
CAB39-206ENST00000493540 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.88□□□□□ -1.31
CAB39-206ENST00000493540 FAM221AA4D161 298 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 WIPF3A6NGB9 483 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 ANKRD66B4E2M5 251 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 MATN3O15232 486 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 RFPL1O75677 317 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 CLDN7O95471 211 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 BPNT1O95861 308 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 FTLP02792 175 aaPredicted RBP6.88□□□□□ -1.31
CAB39-206ENST00000493540 PROCP04070 461 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 ATP1A1P05023 1023 aaKnown RBP6.88□□□□□ -1.31
CAB39-206ENST00000493540 CYP1A2P05177 515 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 MSL3P1P0C860 447 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 ACP5P13686 325 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 TCN2P20062 427 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 NR1D1P20393 614 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 CCNCP24863 283 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 NOP2P46087 812 aaKnown RBP6.88□□□□□ -1.31
CAB39-206ENST00000493540 UBXN1Q04323 297 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 SEMA5AQ13591 1074 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 PIGHQ14442 188 aaPredicted RBP6.88□□□□□ -1.31
CAB39-206ENST00000493540 STX1AQ16623 288 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 KHDC1Q4VXA5 237 aaKnown RBP6.88□□□□□ -1.31
CAB39-206ENST00000493540 TIGD7Q6NT04 549 aaPredicted RBP6.88□□□□□ -1.31
CAB39-206ENST00000493540 LRFN4Q6PJG9 635 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 TMC3Q7Z5M5 1100 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 ADGRG6Q86SQ4 1221 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 SLC9B2Q86UD5 537 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 PLXDC1Q8IUK5 500 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 RBM12BQ8IXT5 1001 aaKnown RBP6.88□□□□□ -1.31
CAB39-206ENST00000493540 CCDC13Q8IYE1 715 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 BBS5Q8N3I7 341 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 PLD5Q8N7P1 536 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 CNTD1Q8N815 330 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 PDCD6IPQ8WUM4 868 aaKnown RBP6.88□□□□□ -1.31
CAB39-206ENST00000493540 RSC1A1Q92681 617 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 OLFM3Q96PB7 478 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 SLC38A3Q99624 504 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 CTRCQ99895 268 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 TBC1D10AQ9BXI6 508 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 TGIF2Q9GZN2 237 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 PCDH9Q9HC56 1237 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 MRPL47Q9HD33 250 aaKnown RBP6.88□□□□□ -1.31
CAB39-206ENST00000493540 SLC40A1Q9NP59 571 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 NT5MQ9NPB1 228 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 TPSG1Q9NRR2 321 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 DTLQ9NZJ0 730 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 ATXN10Q9UBB4 475 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 SLC23A2Q9UGH3 650 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 MOSPD1Q9UJG1 213 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 CROTQ9UKG9 612 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 POLHQ9Y253 713 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 KCNK6Q9Y257 313 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 ACTL7BQ9Y614 415 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 MTORP42345 2549 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 ZFHX3Q15911 3703 aa6.88□□□□□ -1.31
CAB39-206ENST00000493540 SETD2Q9BYW2 2564 aaPredicted RBP6.87□□□□□ -1.31
CAB39-206ENST00000493540 C1orf232A0A0U1RR37 186 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 A0A1W2PQJ5 194 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 C3orf70A6NLC5 250 aaPredicted RBP6.87□□□□□ -1.31
CAB39-206ENST00000493540 C21orf140B9A014 251 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 AGRPO00253 132 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 GAPDHSO14556 408 aaPredicted RBP6.87□□□□□ -1.31
CAB39-206ENST00000493540 POLR1CO15160 346 aaPredicted RBP6.87□□□□□ -1.31
CAB39-206ENST00000493540 INPP4BO15327 924 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 MTSS1O43312 755 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 GRID2O43424 1007 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 VEGFDO43915 354 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 CREG1O75629 220 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 TPM2P07951 284 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 PRKAR1AP10644 381 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 ZNF8P17098 575 aaPredicted RBP6.87□□□□□ -1.31
CAB39-206ENST00000493540 NELFEP18615 380 aaKnown RBP6.87□□□□□ -1.31
CAB39-206ENST00000493540 UQCRFS1P47985 274 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 LEPRP48357 1165 aaKnown RBP6.87□□□□□ -1.31
CAB39-206ENST00000493540 ZNF165P49910 485 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 PPIDQ08752 370 aaKnown RBP6.87□□□□□ -1.31
CAB39-206ENST00000493540 SLC10A2Q12908 348 aaPredicted RBP6.87□□□□□ -1.31
CAB39-206ENST00000493540 ZBTB17Q13105 803 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 IL10RAQ13651 578 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 DOC2BQ14184 412 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 GPR18Q14330 331 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 IFI16Q16666 785 aaKnown RBP6.87□□□□□ -1.31
CAB39-206ENST00000493540 UGT8Q16880 541 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 DEFB109BQ30KR1 87 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 DENND2CQ68D51 928 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 MARK2Q7KZI7 788 aaKnown RBP6.87□□□□□ -1.31
CAB39-206ENST00000493540 CHST15Q7LFX5 561 aaPredicted RBP6.87□□□□□ -1.31
CAB39-206ENST00000493540 TMEM135Q86UB9 458 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 CPNE8Q86YQ8 564 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 PHYKPLQ8IUZ5 450 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 FAM20CQ8IXL6 584 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 CARFQ8N187 725 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 TRAM1L1Q8N609 369 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 Q8NA96 180 aa6.87□□□□□ -1.31
CAB39-206ENST00000493540 RNF214Q8ND24 703 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms