RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 OLFM1Q99784 485 aa16.88■□□□□ 0.29
LIME1-208ENST00000493265 TIMM29Q9BSF4 260 aa16.88■□□□□ 0.29
LIME1-208ENST00000493265 MCMBPQ9BTE3 642 aa16.88■□□□□ 0.29
LIME1-208ENST00000493265 ZDHHC5Q9C0B5 715 aa16.88■□□□□ 0.29
LIME1-208ENST00000493265 UCKL1Q9NWZ5 548 aa16.88■□□□□ 0.29
LIME1-208ENST00000493265 TRNAU1APQ9NX07 287 aaKnown RBP16.88■□□□□ 0.29
LIME1-208ENST00000493265 PSMC3IPQ9P2W1 217 aaPredicted RBP16.88■□□□□ 0.29
LIME1-208ENST00000493265 SPASTQ9UBP0 616 aa16.88■□□□□ 0.29
LIME1-208ENST00000493265 SLC24A2Q9UI40 661 aa16.88■□□□□ 0.29
LIME1-208ENST00000493265 TRMT6Q9UJA5 497 aaKnown RBP16.88■□□□□ 0.29
LIME1-208ENST00000493265 CORO1CQ9ULV4 474 aaPredicted RBP16.88■□□□□ 0.29
LIME1-208ENST00000493265 PSMD13Q9UNM6 376 aa16.88■□□□□ 0.29
LIME1-208ENST00000493265 DOLKQ9UPQ8 538 aa16.88■□□□□ 0.29
LIME1-208ENST00000493265 VWA7Q9Y334 891 aa16.88■□□□□ 0.29
LIME1-208ENST00000493265 ST14Q9Y5Y6 855 aa16.88■□□□□ 0.29
LIME1-208ENST00000493265 COMMD10Q9Y6G5 202 aa16.88■□□□□ 0.29
LIME1-208ENST00000493265 CACNA1GO43497 2377 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 IGF2RP11717 2491 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 MGAT4DA6NG13 374 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 RASGRF2O14827 1237 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 FFAR2O15552 330 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 AQP9O43315 295 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 PIAS2O75928 621 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 KRT38O76015 456 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 TOP3BO95985 862 aaKnown RBP16.87■□□□□ 0.29
LIME1-208ENST00000493265 SERPINB9P50453 376 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 HSPA14Q0VDF9 509 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 PDAP1Q13442 181 aaKnown RBP16.87■□□□□ 0.29
LIME1-208ENST00000493265 ZNF460Q14592 562 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 CASP8Q14790 479 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 SHBQ15464 509 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 OTOAQ7RTW8 1153 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 GATAD2AQ86YP4 633 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 MINDY1Q8N5J2 469 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 OR2L2Q8NH16 312 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 ZIM3Q96PE6 472 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 GPR22Q99680 433 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 SLC30A3Q99726 388 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 DHRS4Q9BTZ2 278 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 GSDMCQ9BYG8 508 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 SPATS2LQ9NUQ6 558 aaKnown RBP16.87■□□□□ 0.29
LIME1-208ENST00000493265 TAS2R13Q9NYV9 303 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 MED16Q9Y2X0 877 aa16.87■□□□□ 0.29
LIME1-208ENST00000493265 DNMT3AQ9Y6K1 912 aaPredicted RBP16.87■□□□□ 0.29
LIME1-208ENST00000493265 PCDH15Q96QU1 1955 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 TDRD6O60522 2096 aaKnown RBP16.86■□□□□ 0.29
LIME1-208ENST00000493265 A0A1B0GTQ1 180 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 PDZK1P1A8MUH7 402 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 TRIM49D1C9J1S8 452 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 CDX4O14627 284 aaPredicted RBP16.86■□□□□ 0.29
LIME1-208ENST00000493265 PHGDHO43175 533 aaKnown RBP16.86■□□□□ 0.29
LIME1-208ENST00000493265 APOA4P06727 396 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 FDXRP22570 491 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 DGKAP23743 735 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 RPL10P27635 214 aaKnown RBP16.86■□□□□ 0.29
LIME1-208ENST00000493265 AOAHP28039 575 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 TAS2R39P59534 338 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 LRP8Q14114 963 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 ELOCQ15369 112 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 DEFB133Q30KQ1 61 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 KRT71Q3SY84 523 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 ADGRD1Q6QNK2 874 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 RAPH1Q70E73 1250 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 CMC1Q7Z7K0 106 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 NRROSQ86YC3 692 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 CEP97Q8IW35 865 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 ZBTB2Q8N680 514 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 GIMAP7Q8NHV1 300 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 HM13Q8TCT9 377 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 GPBAR1Q8TDU6 330 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 SKA2Q8WVK7 121 aaPredicted RBP16.86■□□□□ 0.29
LIME1-208ENST00000493265 KCNJ9Q92806 393 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 LINC00615Q96LM1 132 aaPredicted RBP16.86■□□□□ 0.29
LIME1-208ENST00000493265 COG4Q9H9E3 785 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 ZNF180Q9UJW8 692 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 ZMIZ1Q9ULJ6 1067 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 FAM208BQ5VWN6 2430 aa16.86■□□□□ 0.29
LIME1-208ENST00000493265 PI4KAP42356 2102 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 ASCC3Q8N3C0 2202 aaKnown RBP16.85■□□□□ 0.29
LIME1-208ENST00000493265 TRBV23OR9-2A0A075B6M9 112 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 HMX2A2RU54 273 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 FOXO6A8MYZ6 492 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 DFNA5O60443 496 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 ANXA6P08133 673 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 SNRPAP09012 282 aaKnown RBP16.85■□□□□ 0.29
LIME1-208ENST00000493265 IDSP22304 550 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 EPHA8P29322 1005 aaPredicted RBP16.85■□□□□ 0.29
LIME1-208ENST00000493265 RXRGP48443 463 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 CCT8P50990 548 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 CLCN7P51798 805 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 TIAL1Q01085 375 aaKnown RBP eCLIP16.85■□□□□ 0.29
LIME1-208ENST00000493265 POU4F1Q01851 419 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 CEP85LQ5SZL2 805 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 LGSNQ5TDP6 509 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 UGT3A1Q6NUS8 523 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 GKN2Q86XP6 184 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 CPNE9Q8IYJ1 553 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 IQCKQ8N0W5 287 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 FSTL5Q8N475 847 aaPredicted RBP16.85■□□□□ 0.29
LIME1-208ENST00000493265 FAM46DQ8NEK8 389 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms