RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 USP1O94782 785 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 SEC31AO94979 1220 aaKnown RBP13.52□□□□□ -0.25
PTPN7-215ENST00000492451 MTHFD1P11586 935 aaKnown RBP13.52□□□□□ -0.25
PTPN7-215ENST00000492451 ARNTP27540 789 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 NDUFS1P28331 727 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 ARCN1P48444 511 aaKnown RBP13.52□□□□□ -0.25
PTPN7-215ENST00000492451 ZFP36L1Q07352 338 aaKnown RBP13.52□□□□□ -0.25
PTPN7-215ENST00000492451 C2orf54Q08AI8 447 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 EIF3IQ13347 325 aaKnown RBP13.52□□□□□ -0.25
PTPN7-215ENST00000492451 SEMA3AQ14563 771 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 RPE65Q16518 533 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 WHAMMP3Q1A5X7 153 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 HIBCHQ6NVY1 386 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-215ENST00000492451 NEPROQ6NW34 567 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 WDR74Q6RFH5 385 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-215ENST00000492451 TMEM26Q6ZUK4 368 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 USP53Q70EK8 1073 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 LMNTD2Q8IXW0 634 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 OR4D9Q8NGE8 314 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 GABPB2Q8TAK5 448 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-215ENST00000492451 ZNF592Q92610 1267 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 TMEM159Q96B96 161 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 ATXN7L3BQ96GX2 97 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 LIN37Q96GY3 246 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-215ENST00000492451 COG4Q9H9E3 785 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 DKK4Q9UBT3 224 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 VPS9D1Q9Y2B5 631 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 PCDHB1Q9Y5F3 818 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 AK5Q9Y6K8 562 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 COLEC10Q9Y6Z7 277 aa13.52□□□□□ -0.25
PTPN7-215ENST00000492451 NBEAQ8NFP9 2946 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 CCDC187A0A096LP49 1063 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 IFRD1O00458 451 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 TTC4O95801 387 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 HOXB3P14651 431 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 PGAM1P18669 254 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 OGNP20774 298 aaKnown RBP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 LSSP48449 732 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 CD151P48509 253 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 ITGA8P53708 1063 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 ARL4CP56559 192 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 TRA2AQ13595 282 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 THOC5Q13769 683 aaKnown RBP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 KRT33BQ14525 404 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 HIF1AQ16665 826 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 LONRF1Q17RB8 773 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 TYSND1Q2T9J0 566 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 ZNF658BQ4V348 819 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 SYTL3Q4VX76 610 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 PTRHD1Q6GMV3 140 aaKnown RBP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 CAPRIN2Q6IMN6 1127 aaKnown RBP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 LDB1Q86U70 411 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 ZNF761Q86XN6 746 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 LSMEM2Q8N112 164 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 WDR36Q8NI36 951 aaKnown RBP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 CALML6Q8TD86 181 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 ELMO1Q92556 727 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 LRRC39Q96DD0 335 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 C12orf66Q96MD2 445 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 FCRL3Q96P31 734 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 EBNA1BP2Q99848 306 aaKnown RBP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 NUDT22Q9BRQ3 303 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 ERP44Q9BS26 406 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 CARD6Q9BX69 1037 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 TRIM31Q9BZY9 425 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 ZMYND15Q9H091 742 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 POLR1BQ9H9Y6 1135 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 RDH14Q9HBH5 336 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 EPB41L5Q9HCM4 733 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 IMP3Q9NV31 184 aaKnown RBP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 AKAP7Q9P0M2 348 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-215ENST00000492451 GNPTGQ9UJJ9 305 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 PRSS21Q9Y6M0 314 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 FAM169AQ9Y6X4 670 aa13.51□□□□□ -0.25
PTPN7-215ENST00000492451 ZCWPW2A0A1B0GU75 182 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 H3BMM5 538 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 KPNA5O15131 536 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 UBXN7O94888 489 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 AMD1P17707 334 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 RPS3P23396 243 aaKnown RBP eCLIP13.5□□□□□ -0.25
PTPN7-215ENST00000492451 MLLT3P42568 568 aaPredicted RBP13.5□□□□□ -0.25
PTPN7-215ENST00000492451 MAPK9P45984 424 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 RPL21P46778 160 aaKnown RBP13.5□□□□□ -0.25
PTPN7-215ENST00000492451 PDX1P52945 283 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 LIMK2P53671 638 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 ADARP55265 1226 aaKnown RBP13.5□□□□□ -0.25
PTPN7-215ENST00000492451 DHX9Q08211 1270 aaKnown RBP13.5□□□□□ -0.25
PTPN7-215ENST00000492451 CALCOCO2Q13137 446 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 GPR18Q14330 331 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 BBS9Q3SYG4 887 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 PHF19Q5T6S3 580 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 NKAIN2Q5VXU1 208 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 TMEM71Q6P5X7 295 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 KLHL35Q6PF15 583 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 XKR5Q6UX68 686 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 B3GNT8Q7Z7M8 397 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 PLXDC1Q8IUK5 500 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 CILP2Q8IUL8 1156 aa13.5□□□□□ -0.25
PTPN7-215ENST00000492451 SLITRK4Q8IW52 837 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms