RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 NELL2Q99435 816 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 AP4B1Q9Y6B7 739 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 TCRBV21S2A2A0A5A6 115 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 TRIM38O00635 465 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 ACOT8O14734 319 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 SLC4A1P02730 911 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 P2RY2P41231 377 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 SH3BGRP55822 239 aaPredicted RBP22.43■■□□□ 1.18
USF3-203ENST00000491165 SEPT6Q14141 434 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 CNSTQ6PJW8 725 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 SYT13Q7L8C5 426 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 LYSMD3Q7Z3D4 306 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 DSG4Q86SJ6 1040 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 AFAP1L2Q8N4X5 818 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 CLDN23Q96B33 292 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 SUDS3Q9H7L9 328 aaPredicted RBP22.43■■□□□ 1.18
USF3-203ENST00000491165 PCDH12Q9NPG4 1184 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 UBAP1Q9NZ09 502 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 B4GALT6Q9UBX8 382 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 CCL22O00626 93 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 GABRG2P18507 467 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 HSPA13P48723 471 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 ATXN3P54252 364 aaPredicted RBP22.42■■□□□ 1.18
USF3-203ENST00000491165 FAM83EQ2M2I3 478 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 NEPROQ6NW34 567 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 GK5Q6ZS86 529 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 KIAA0408Q6ZU52 694 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 BRSK1Q8TDC3 778 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 CCDC126Q96EE4 140 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 PKP2Q99959 881 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 IGSF5Q9NSI5 407 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.42■■□□□ 1.184e-6■■■■□ 20.1
USF3-203ENST00000491165 SIT1Q9Y3P8 196 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 A0A1W2PP55 124 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 UPK3BL1B0FP48 263 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 UPK3BL2E5RIL1 263 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 C1QTNF3-AMACRE9PGA6 284 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 PGM3O95394 542 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 CLDN7O95471 211 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 ADRB3P13945 408 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 CLCN2P51788 898 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 CSHL1Q14406 222 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 PIP5KL1Q5T9C9 394 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 ZNF776Q68DI1 518 aaPredicted RBP22.42■■□□□ 1.18
USF3-203ENST00000491165 GLT6D1Q7Z4J2 308 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 SPATA24Q86W54 205 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 ADA2Q9NZK5 511 aa22.42■■□□□ 1.18
USF3-203ENST00000491165 ZDBF2Q9HCK1 2354 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 MROH6A6NGR9 719 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 CAPNS1P04632 268 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 ETS2P15036 469 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 MTAPQ13126 283 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 MAPRE2Q15555 327 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 TECRLQ5HYJ1 363 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 AGBL4Q5VU57 503 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 CRTC1Q6UUV9 634 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 CHSY3Q70JA7 882 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 OR13C4Q8NGS5 318 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 ASB9Q96DX5 294 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 LYSMD1Q96S90 227 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 CHRDQ9H2X0 955 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 EML4Q9HC35 981 aaKnown RBP22.41■■□□□ 1.18
USF3-203ENST00000491165 MAGEE1Q9HCI5 957 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 MRPL40Q9NQ50 206 aaKnown RBP22.41■■□□□ 1.18
USF3-203ENST00000491165 ZNF711Q9Y462 761 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 CACNA1IQ9P0X4 2223 aa22.41■■□□□ 1.18
USF3-203ENST00000491165 NEMP2A6NFY4 417 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 GOLGA8CPA6NN73 597 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 TCN1P20061 433 aaPredicted RBP22.4■■□□□ 1.18
USF3-203ENST00000491165 TAS2R38P59533 333 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 PSME3P61289 254 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 STX5Q13190 355 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 TMEM31Q5JXX7 168 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 RBM20Q5T481 1227 aaKnown RBP22.4■■□□□ 1.18
USF3-203ENST00000491165 AGAP9Q5VTM2 703 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 LRRC66Q68CR7 880 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 ERN2Q76MJ5 926 aaKnown RBP22.4■■□□□ 1.18
USF3-203ENST00000491165 TTC30BQ8N4P2 665 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 OR13J1Q8NGT2 312 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 HCAR2Q8TDS4 363 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 HHIPQ96QV1 700 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 FIS1Q9Y3D6 152 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 C1orf232A0A0U1RR37 186 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 RPL5P46777 297 aaKnown RBP22.4■■□□□ 1.18
USF3-203ENST00000491165 POLR2LP62875 67 aaKnown RBP22.4■■□□□ 1.18
USF3-203ENST00000491165 RALGDSQ12967 914 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 LSAMPQ13449 338 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 SQLEQ14534 574 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 CALML6Q8TD86 181 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 HMGB4Q8WW32 186 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 PPP1R16AQ96I34 528 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 CNBD2Q96M20 576 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 RANBP9Q96S59 729 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 OSBPL6Q9BZF3 934 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 MEAF6Q9HAF1 191 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 BPIFA1Q9NP55 256 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 SUCOQ9UBS9 1254 aaKnown RBP22.4■■□□□ 1.18
USF3-203ENST00000491165 PCDHGA7Q9Y5G6 932 aa22.4■■□□□ 1.18
USF3-203ENST00000491165 LAMA1P25391 3075 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 TNFAIP8O95379 198 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms