RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, human

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-208	ENST00000490476	PCED1A	Q9H1Q7	454 aa		4.91	□□□□□ -1.62
SSX2IP-208	ENST00000490476	PLK3	Q9H4B4	646 aa		4.91	□□□□□ -1.62
SSX2IP-208	ENST00000490476	OGFR	Q9NZT2	677 aa		4.91	□□□□□ -1.62
SSX2IP-208	ENST00000490476	PTRH2	Q9Y3E5	179 aa	Known RBP	4.91	□□□□□ -1.62
SSX2IP-208	ENST00000490476	PLXNA4	Q9HCM2	1894 aa		4.91	□□□□□ -1.62
SSX2IP-208	ENST00000490476	KIF26A	Q9ULI4	1882 aa	Predicted RBP	4.91	□□□□□ -1.62
SSX2IP-208	ENST00000490476	HIVEP1	P15822	2718 aa		4.91	□□□□□ -1.62
SSX2IP-208	ENST00000490476	NOTCH1	P46531	2555 aa		4.91	□□□□□ -1.62
SSX2IP-208	ENST00000490476	MUC22	E2RYF6	1773 aa	Predicted RBP	4.91	□□□□□ -1.62
SSX2IP-208	ENST00000490476		A0A0U1RQF3	1178 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	C1orf226	A1L170	272 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SH2B2	O14492	632 aa	Predicted RBP	4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	LUC7L3	O95232	432 aa	Known RBP	4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	HMOX1	P09601	288 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SELL	P14151	372 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CERS1	P27544	350 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CSTF1	Q05048	431 aa	Known RBP	4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	NAE1	Q13564	534 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	NTRK2	Q16620	822 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SGO1	Q5FBB7	561 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	NCAPH2	Q6IBW4	605 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SLC2A7	Q6PXP3	512 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	COPS6	Q7L5N1	327 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	FAM9B	Q8IZU0	186 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	KDM1B	Q8NB78	822 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	KCTD6	Q8NC69	237 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	TMEM18	Q96B42	140 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	TEX12	Q9BXU0	123 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	KLHL4	Q9C0H6	718 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	TMPRSS5	Q9H3S3	457 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	PDZD7	Q9H5P4	517 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	TBC1D17	Q9HA65	648 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CYSLTR2	Q9NS75	346 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ANKRD10	Q9NXR5	420 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CISD1	Q9NZ45	108 aa	Known RBP	4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CPSF2	Q9P2I0	782 aa	Known RBP	4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	MAU2	Q9Y6X3	613 aa		4.9	□□□□□ -1.63
SSX2IP-208	ENST00000490476	MYH7B	A7E2Y1	1941 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	NIPBL	Q6KC79	2804 aa	eCLIP	4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SCAMP1	O15126	338 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	WDR46	O15213	610 aa	Known RBP	4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ADAM20	O43506	726 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	HCRTR2	O43614	444 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	BCAR3	O75815	825 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	LATS1	O95835	1130 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	APOA4	P06727	396 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SRPRA	P08240	638 aa	Known RBP	4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	NR2F1	P10589	423 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	IL11	P20809	199 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	AGA	P20933	346 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	KCNJ4	P48050	445 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	LMAN1	P49257	510 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	PMS2	P54278	862 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ACSM2A	Q08AH3	577 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	TCP10	Q12799	353 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	FAM133B	Q5BKY9	247 aa	Known RBP	4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ACSM2B	Q68CK6	577 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	JADE1	Q6IE81	842 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	PRPF39	Q86UA1	669 aa	Known RBP	4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	PALB2	Q86YC2	1186 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	MB21D2	Q8IYB1	491 aa	Predicted RBP	4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	APPL2	Q8NEU8	664 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SLC22A18	Q96BI1	424 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	VCPIP1	Q96JH7	1222 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CNDP2	Q96KP4	475 aa	Known RBP	4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	GFM1	Q96RP9	751 aa	Known RBP	4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ABHD1	Q96SE0	405 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	GAD1	Q99259	594 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	TMEM47	Q9BQJ4	181 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	GPR108	Q9NPR9	543 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	IL17B	Q9UHF5	180 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	DUSP12	Q9UNI6	340 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	FAM169A	Q9Y6X4	670 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	GRIN2D	O15399	1336 aa		4.89	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SIPA1L1	O43166	1804 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CRYBG3	Q68DQ2	2970 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ADAMTS9	Q9P2N4	1935 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	PTPRB	P23467	1997 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CHL1	O00533	1208 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	DKC1	O60832	514 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CNMD	O75829	334 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	MMP2	P08253	660 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	MYZAP	P0CAP1	466 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	DCTD	P32321	178 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	FAM27E3	Q08E93	113 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	DAZAP2	Q15038	168 aa	Predicted RBP	4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SF3A2	Q15428	464 aa	Known RBP	4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	INPP5J	Q15735	1006 aa	Predicted RBP	4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	C2orf68	Q2NKX9	166 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CDON	Q4KMG0	1287 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	IGSF11	Q5DX21	431 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	C6orf141	Q5SZD1	244 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	LRIF1	Q5T3J3	769 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ADGRG3	Q86Y34	549 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	RBFA	Q8N0V3	343 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	HJURP	Q8NCD3	748 aa	Predicted RBP	4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SLC16A11	Q8NCK7	471 aa		4.88	□□□□□ -1.63

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