RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 A0A087WW49 117 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 IGLV9-49A0A0B4J1Y8 123 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 PLEKHD1A6NEE1 506 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 OR6C76A6NM76 312 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 PRR32B1ATL7 298 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 TPD52L2O43399 206 aaKnown RBP3.34□□□□□ -1.87
HMGN1-218ENST00000490032 GPC4O75487 556 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 SORBS2O94875 1100 aaKnown RBP3.34□□□□□ -1.87
HMGN1-218ENST00000490032 EDN1P05305 212 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 CEACAM8P31997 349 aaPredicted RBP3.34□□□□□ -1.87
HMGN1-218ENST00000490032 NOVP48745 357 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 DSCR10P59022 87 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 P2RY6Q15077 328 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 ASTE1Q2TB18 679 aaPredicted RBP3.34□□□□□ -1.87
HMGN1-218ENST00000490032 PWWP2BQ6NUJ5 590 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 ZNF613Q6PF04 617 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 NGEFQ8N5V2 710 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 NAXEQ8NCW5 288 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 TMEM143Q96AN5 459 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 PRAC1Q96KF2 57 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 PPM1MQ96MI6 270 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 ASIC3Q9UHC3 531 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 SLC7A7Q9UM01 511 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 EXOGQ9Y2C4 368 aaKnown RBP3.34□□□□□ -1.87
HMGN1-218ENST00000490032 PIAS3Q9Y6X2 628 aa3.34□□□□□ -1.87
HMGN1-218ENST00000490032 COL5A2P05997 1499 aaPredicted RBP3.34□□□□□ -1.88
HMGN1-218ENST00000490032 AGRNO00468 2067 aa3.34□□□□□ -1.88
HMGN1-218ENST00000490032 IGHV4-4A0A075B6R2 117 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 TRMUO75648 421 aaKnown RBP3.33□□□□□ -1.88
HMGN1-218ENST00000490032 GH2P01242 217 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 HMBSP08397 361 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 NFKBIAP25963 317 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 KRT9P35527 623 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 PRKAA1Q13131 559 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 ZSCAN23Q3MJ62 389 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 TCTE1Q5JU00 501 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 KRTAP5-4Q6L8H1 288 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 PXKQ7Z7A4 578 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 ZNF614Q8N883 585 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 OR2T6Q8NHC8 308 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 GAD1Q99259 594 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 VGLL1Q99990 258 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 SYT11Q9BT88 431 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 HGH1Q9BTY7 390 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 SMC4Q9NTJ3 1288 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 PLCXD1Q9NUJ7 323 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 FLRT3Q9NZU0 649 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 NENFQ9UMX5 172 aa3.33□□□□□ -1.88
HMGN1-218ENST00000490032 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.33□□□□□ -1.88
HMGN1-218ENST00000490032 NDUFS4O43181 175 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 RAF1P04049 648 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 SRPRAP08240 638 aaKnown RBP3.32□□□□□ -1.88
HMGN1-218ENST00000490032 RPS18P62269 152 aaKnown RBP3.32□□□□□ -1.88
HMGN1-218ENST00000490032 LGALS3BPQ08380 585 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 TEAD2Q15562 447 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 GCNT6Q5T4J0 391 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 GKAP1Q5VSY0 366 aaPredicted RBP3.32□□□□□ -1.88
HMGN1-218ENST00000490032 ARHGEF16Q5VV41 709 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 LINGO4Q6UY18 593 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 SLC16A9Q7RTY1 509 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 TMTC2Q8N394 836 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 BMPERQ8N8U9 685 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 TDRD7Q8NHU6 1098 aaKnown RBP3.32□□□□□ -1.88
HMGN1-218ENST00000490032 FGFBP3Q8TAT2 258 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 POMGNT1Q8WZA1 660 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 HSD17B8Q92506 261 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 MOAP1Q96BY2 351 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 SGK494Q96LW2 274 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 ZNF582Q96NG8 517 aaPredicted RBP3.32□□□□□ -1.88
HMGN1-218ENST00000490032 NCAPGQ9BPX3 1015 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 TRIM51Q9BSJ1 452 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 CABLES2Q9BTV7 478 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 C1QTNF1Q9BXJ1 281 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 PLK3Q9H4B4 646 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 CMAHPQ9Y471 501 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 SOS1Q07889 1333 aaPredicted RBP3.32□□□□□ -1.88
HMGN1-218ENST00000490032 TDRD9Q8NDG6 1382 aaKnown RBP3.32□□□□□ -1.88
HMGN1-218ENST00000490032 RUSC2Q8N2Y8 1516 aa3.32□□□□□ -1.88
HMGN1-218ENST00000490032 DNM1LO00429 736 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 HS6ST1O60243 411 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 OR2C1O95371 312 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 ACP2P11117 423 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 CAMPP49913 170 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 CDH11P55287 796 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 SNX16P57768 344 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 SNRPD1P62314 119 aaKnown RBP3.31□□□□□ -1.88
HMGN1-218ENST00000490032 PRAMEP78395 509 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 IRX6P78412 446 aaPredicted RBP3.31□□□□□ -1.88
HMGN1-218ENST00000490032 G3BP1Q13283 466 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGN1-218ENST00000490032 GPR17Q13304 367 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 ADALQ6DHV7 355 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 SPINK14Q6IE38 97 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 PSRC1Q6PGN9 363 aaPredicted RBP3.31□□□□□ -1.88
HMGN1-218ENST00000490032 ZNF554Q86TJ5 538 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 TICAM1Q8IUC6 712 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 ARID3BQ8IVW6 561 aaPredicted RBP3.31□□□□□ -1.88
HMGN1-218ENST00000490032 PDILTQ8N807 584 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 ZNF383Q8NA42 475 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 OLIG1Q8TAK6 271 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms