RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 LGI4Q8N135 537 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 EHBP1Q8NDI1 1231 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 MNS1Q8NEH6 495 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 GOLGA5Q8TBA6 731 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 UBXN4Q92575 508 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 RSC1A1Q92681 617 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 PTERQ96BW5 349 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 ZDHHC12Q96GR4 267 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 SLC2A13Q96QE2 648 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 AGAP2Q99490 1192 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 DNAJC7Q99615 494 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 PKP2Q99959 881 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 TM6SF2Q9BZW4 377 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 PCIF1Q9H4Z3 704 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 MMRN2Q9H8L6 949 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 METTL14Q9HCE5 456 aaKnown RBP7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 LUC7LQ9NQ29 371 aaKnown RBP7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 OLFML3Q9NRN5 406 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 MYO1AQ9UBC5 1043 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 CPNE7Q9UBL6 633 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 EPHA6Q9UF33 1036 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 SLC17A4Q9Y2C5 497 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 CCDC66A2RUB6 948 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 ZNF233A6NK53 670 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 SLC16A3O15427 465 aaKnown RBP7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 TCF21O43680 179 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 URI1O94763 535 aaPredicted RBP7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 ARAFP10398 606 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 DLATP10515 647 aaKnown RBP7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 PAX1P15863 534 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 AMD1P17707 334 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 TNNI1P19237 187 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 NR2F2P24468 414 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 MARSP56192 900 aaKnown RBP7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 PPP1CAP62136 330 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 DLG4P78352 724 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 CDK17Q00537 523 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 POU4F1Q01851 419 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 INCA1Q0VD86 236 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 ADIGQ0VDE8 80 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 PLCL1Q15111 1095 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 POU4F3Q15319 338 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 SLC25A35Q3KQZ1 300 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 ZCWPW2Q504Y3 356 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 WIPI1Q5MNZ9 446 aaPredicted RBP7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 VAX1Q5SQQ9 334 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 PNCKQ6P2M8 343 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 ACAD11Q709F0 780 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 KIAA1328Q86T90 577 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 ZNF354CQ86Y25 554 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 LIX1LQ8IVB5 337 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 D2HGDHQ8N465 521 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 EEF2KMTQ96G04 330 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 BTN2A3PQ96KV6 586 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 MRGPRX2Q96LB1 330 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 SERPINB11Q96P15 392 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 OR2M4Q96R27 311 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 DESI2Q9BSY9 194 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 TSGA10Q9BZW7 698 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 C12orf65Q9H3J6 166 aaKnown RBP7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 DEF6Q9H4E7 631 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 NOL6Q9H6R4 1146 aaKnown RBP7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 LZTFL1Q9NQ48 299 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 CNOT8Q9UFF9 292 aaKnown RBP7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 ARMCX3Q9UH62 379 aaPredicted RBP7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 TRAF3IP3Q9Y228 551 aa7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 MRPS2Q9Y399 296 aaKnown RBP7.24□□□□□ -1.25
EXOSC3-206ENST00000489414 A0A0D9SEW6 157 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 ASPDHA6ND91 283 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 TULP2O00295 520 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 SYT5O00445 386 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 KRIT1O00522 736 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 CNOT3O75175 753 aaKnown RBP7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 RECQL5O94762 991 aaPredicted RBP7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 NR3C1P04150 777 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 MMP11P24347 488 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 UQCRC1P31930 480 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 ASPAP45381 313 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 SUOXP51687 545 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 UBE2IP63279 158 aaKnown RBP7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 LRP8Q14114 963 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 MEA1Q16626 185 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 ZNF789Q5FWF6 425 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 IRGCQ6NXR0 463 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 FBXL22Q6P050 247 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 FBXO42Q6P3S6 717 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 RAD9BQ6WBX8 426 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 TMEM26Q6ZUK4 368 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 EPM2AIP1Q7L775 607 aaPredicted RBP7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 STRADAQ7RTN6 431 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 KMT5CQ86Y97 462 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 TRIM59Q8IWR1 403 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 SYCP3Q8IZU3 236 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 SCML4Q8N228 414 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 RFLNBQ8N5W9 214 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 SUN3Q8TAQ9 357 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 HMCESQ96FZ2 354 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 CCDC42Q96M95 316 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 C17orf62Q9BQA9 187 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms