RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 SEL1L2Q5TEA6 688 aa22.47■■□□□ 1.19
COL9A3-213ENST00000489045 HM13Q8TCT9 377 aa22.47■■□□□ 1.19
COL9A3-213ENST00000489045 HEXDCQ8WVB3 486 aa22.47■■□□□ 1.19
COL9A3-213ENST00000489045 ELMO2Q96JJ3 720 aa22.47■■□□□ 1.19
COL9A3-213ENST00000489045 SLC45A3Q96JT2 553 aa22.47■■□□□ 1.19
COL9A3-213ENST00000489045 TSGA10Q9BZW7 698 aa22.47■■□□□ 1.19
COL9A3-213ENST00000489045 ZDHHC3Q9NYG2 299 aa22.47■■□□□ 1.19
COL9A3-213ENST00000489045 IGLV3-16A0A075B6K0 115 aa22.46■■□□□ 1.19
COL9A3-213ENST00000489045 IGHV5-51A0A0C4DH38 117 aa22.46■■□□□ 1.19
COL9A3-213ENST00000489045 TRBV5-4A0A0C4DH59 114 aa22.46■■□□□ 1.19
COL9A3-213ENST00000489045 ZNF891A8MT65 544 aaPredicted RBP22.46■■□□□ 1.19
COL9A3-213ENST00000489045 B8ZZF3 427 aa22.46■■□□□ 1.19
COL9A3-213ENST00000489045 H7C0S8 307 aa22.46■■□□□ 1.19
COL9A3-213ENST00000489045 PSMD3O43242 534 aa22.46■■□□□ 1.19
COL9A3-213ENST00000489045 PRSS56P0CW18 603 aa22.46■■□□□ 1.19
COL9A3-213ENST00000489045 NELFEP18615 380 aaKnown RBP22.46■■□□□ 1.19
COL9A3-213ENST00000489045 MAP7Q14244 749 aa22.46■■□□□ 1.19
COL9A3-213ENST00000489045 IL11RAQ14626 422 aa22.46■■□□□ 1.19
COL9A3-213ENST00000489045 SERPINA9Q86WD7 417 aa22.46■■□□□ 1.19
COL9A3-213ENST00000489045 RASGRP3Q8IV61 690 aa22.46■■□□□ 1.19
COL9A3-213ENST00000489045 CFAP206Q8IYR0 622 aa22.46■■□□□ 1.19
COL9A3-213ENST00000489045 OR5K3A6NET4 321 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 LIASO43766 372 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 KRT86O43790 486 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 ACRV1P26436 265 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 STAT5AP42229 794 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 GSE1Q14687 1217 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 OASLQ15646 514 aaKnown RBP22.45■■□□□ 1.18
COL9A3-213ENST00000489045 TAS2R42Q7RTR8 314 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 ESX1Q8N693 406 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 STYXQ8WUJ0 223 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 ZFPM2Q8WW38 1151 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 UBXN4Q92575 508 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 MAP3K3Q99759 626 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 EFHD1Q9BUP0 239 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 KIR3DX1Q9H7L2 352 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 SEMA5BQ9P283 1151 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 IL17BQ9UHF5 180 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 SLC24A2Q9UI40 661 aa22.45■■□□□ 1.18
COL9A3-213ENST00000489045 TENM4Q6N022 2769 aa22.44■■□□□ 1.18
COL9A3-213ENST00000489045 CCDC78A2IDD5 438 aa22.44■■□□□ 1.18
COL9A3-213ENST00000489045 KIAA0754O94854 1291 aa22.44■■□□□ 1.18
COL9A3-213ENST00000489045 FGF5P12034 268 aa22.44■■□□□ 1.18
COL9A3-213ENST00000489045 GSDMDP57764 484 aa22.44■■□□□ 1.18
COL9A3-213ENST00000489045 NFATC3Q12968 1075 aa22.44■■□□□ 1.18
COL9A3-213ENST00000489045 DNTTIP2Q5QJE6 756 aaKnown RBP22.44■■□□□ 1.18
COL9A3-213ENST00000489045 CAPRIN2Q6IMN6 1127 aaKnown RBP22.44■■□□□ 1.18
COL9A3-213ENST00000489045 LINC00523Q86TU6 105 aa22.44■■□□□ 1.18
COL9A3-213ENST00000489045 OOSP2Q86WS3 158 aa22.44■■□□□ 1.18
COL9A3-213ENST00000489045 SIDT2Q8NBJ9 832 aaKnown RBP22.44■■□□□ 1.18
COL9A3-213ENST00000489045 CDKN2AIPNLQ96HQ2 116 aa22.44■■□□□ 1.18
COL9A3-213ENST00000489045 SLC41A2Q96JW4 573 aa22.44■■□□□ 1.18
COL9A3-213ENST00000489045 CCM2Q9BSQ5 444 aa22.44■■□□□ 1.18
COL9A3-213ENST00000489045 HRASLS2Q9NWW9 162 aa22.44■■□□□ 1.18
COL9A3-213ENST00000489045 RPS6KL1Q9Y6S9 549 aa22.44■■□□□ 1.18
COL9A3-213ENST00000489045 C17orf113A0A1B0GUU1 675 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 OR6C74A6NCV1 312 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 NKX2-8O15522 239 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 PRKAR1AP10644 381 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 STIP1P31948 543 aaKnown RBP22.43■■□□□ 1.18
COL9A3-213ENST00000489045 CACNG1Q06432 222 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 KCNAB1Q14722 419 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 CYB5D1Q6P9G0 228 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 BORAQ6PGQ7 559 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 C6orf15Q6UXA7 325 aaPredicted RBP22.43■■□□□ 1.18
COL9A3-213ENST00000489045 PPP1R3BQ86XI6 285 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 SLC13A5Q86YT5 568 aaPredicted RBP22.43■■□□□ 1.18
COL9A3-213ENST00000489045 PIANPQ8IYJ0 282 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 GALNT6Q8NCL4 622 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 OR52K1Q8NGK4 314 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 C1orf54Q8WWF1 131 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 CD180Q99467 661 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 FRMD8P1Q9BZ68 369 aaPredicted RBP22.43■■□□□ 1.18
COL9A3-213ENST00000489045 COG4Q9H9E3 785 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 VPS37BQ9H9H4 285 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 LNPEPQ9UIQ6 1025 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 HEBP2Q9Y5Z4 205 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 COLEC10Q9Y6Z7 277 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 SPTA1P02549 2419 aa22.43■■□□□ 1.18
COL9A3-213ENST00000489045 TLCD2A6NGC4 264 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 SPAG6O75602 509 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 IFNB1P01574 187 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 FOLR1P15328 257 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 NDUFS1P28331 727 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 CDC20Q12834 499 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 TUBB3Q13509 450 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 KRT33BQ14525 404 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 DBN1Q16643 649 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.42■■□□□ 1.18
COL9A3-213ENST00000489045 ZNF658BQ4V348 819 aaPredicted RBP22.42■■□□□ 1.18
COL9A3-213ENST00000489045 CCDC38Q502W7 563 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 CERS6Q6ZMG9 384 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 CLDN19Q8N6F1 224 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 STARD8Q92502 1023 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 STAMBPL1Q96FJ0 436 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 ALS2CR12Q96Q35 445 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 ETNK1Q9HBU6 452 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 PDE7BQ9NP56 450 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 STARD5Q9NSY2 213 aa22.42■■□□□ 1.18
COL9A3-213ENST00000489045 ZNF148Q9UQR1 794 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms