RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 C1QTNF1Q9BXJ1 281 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 MAF1Q9H063 256 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 PPIL3Q9H2H8 161 aaKnown RBP3.34□□□□□ -1.87
RFC4-213ENST00000489028 EIF2B3Q9NR50 452 aaKnown RBP3.34□□□□□ -1.87
RFC4-213ENST00000489028 NPAP1Q9NZP6 1156 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 GAGE2DQ9UEU5 116 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 PNMA2Q9UL42 364 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 PRSS51A0A1B0GVH4 220 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 OR6C76A6NM76 312 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 AGAP14A8MT82 685 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 PTGES3LE9PB15 166 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 NR5A2O00482 541 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 TO15178 435 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 NDUFS4O43181 175 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 PAPSS1O43252 624 aaPredicted RBP3.33□□□□□ -1.88
RFC4-213ENST00000489028 DOK2O60496 412 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 MITFO75030 526 aaPredicted RBP3.33□□□□□ -1.88
RFC4-213ENST00000489028 NADKO95544 446 aaPredicted RBP3.33□□□□□ -1.88
RFC4-213ENST00000489028 CAVIN2O95810 425 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 NGFP01138 241 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 FRMD6-AS1P0C7T7 363 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 PSMC4P43686 418 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 RXRGP48443 463 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 MRPS5P82675 430 aaKnown RBP3.33□□□□□ -1.88
RFC4-213ENST00000489028 KCNC3Q14003 757 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 KIAA1644Q3SXP7 199 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 GCNT6Q5T4J0 391 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 KLC3Q6P597 504 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 ZNF497Q6ZNH5 498 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 DAZLQ92904 295 aaKnown RBP3.33□□□□□ -1.88
RFC4-213ENST00000489028 CEP295NLQ96MC4 621 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 RHNO1Q9BSD3 238 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 ABHD6Q9BV23 337 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 TAS2R14Q9NYV8 317 aa3.33□□□□□ -1.88
RFC4-213ENST00000489028 EXO1Q9UQ84 846 aaKnown RBP3.33□□□□□ -1.88
RFC4-213ENST00000489028 A0A0G2JLW4 131 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 A0A1B0GU03 582 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 LNP1A1A4G5 178 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 VILLO15195 856 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 ZNF821O75541 412 aaPredicted RBP3.32□□□□□ -1.88
RFC4-213ENST00000489028 CREG1O75629 220 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 CSPG5O95196 566 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 ZNF26P17031 533 aaPredicted RBP3.32□□□□□ -1.88
RFC4-213ENST00000489028 VEGFCP49767 419 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 HSD17B4P51659 736 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 ARF3P61204 181 aaPredicted RBP3.32□□□□□ -1.88
RFC4-213ENST00000489028 SNRPEP62304 92 aaKnown RBP3.32□□□□□ -1.88
RFC4-213ENST00000489028 ARF1P84077 181 aaKnown RBP3.32□□□□□ -1.88
RFC4-213ENST00000489028 PMP22Q01453 160 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 FAM98BQ52LJ0 330 aaKnown RBP3.32□□□□□ -1.88
RFC4-213ENST00000489028 ZC2HC1BQ5TFG8 222 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 ADALQ6DHV7 355 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 SH2D5Q6ZV89 423 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 GALNT5Q7Z7M9 940 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 GPALPP1Q8IXQ4 340 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 TMTC2Q8N394 836 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 ZNF248Q8NDW4 579 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 WDR20Q8TBZ3 569 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 LRRC59Q96AG4 307 aaKnown RBP3.32□□□□□ -1.88
RFC4-213ENST00000489028 ERLEC1Q96DZ1 483 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 C16orf70Q9BSU1 422 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 MOV10L1Q9BXT6 1211 aaKnown RBP3.32□□□□□ -1.88
RFC4-213ENST00000489028 HRH4Q9H3N8 390 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 WSB2Q9NYS7 404 aaPredicted RBP3.32□□□□□ -1.88
RFC4-213ENST00000489028 TMEM181Q9P2C4 612 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 RHCGQ9UBD6 479 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 AMACRQ9UHK6 382 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 KCNJ14Q9UNX9 436 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 PYGO1Q9Y3Y4 419 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 SPIN1Q9Y657 262 aaPredicted RBP3.32□□□□□ -1.88
RFC4-213ENST00000489028 ASTN2O75129 1339 aaPredicted RBP3.32□□□□□ -1.88
RFC4-213ENST00000489028 SOS1Q07889 1333 aaPredicted RBP3.32□□□□□ -1.88
RFC4-213ENST00000489028 DISP3Q9P2K9 1392 aa3.32□□□□□ -1.88
RFC4-213ENST00000489028 STK36Q9NRP7 1315 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 AP3D1O14617 1153 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 CLIC2O15247 247 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 H1F0P07305 194 aaKnown RBP3.31□□□□□ -1.88
RFC4-213ENST00000489028 CEACAM1P13688 526 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 DRG2P55039 364 aaKnown RBP3.31□□□□□ -1.88
RFC4-213ENST00000489028 MFAP4P55083 255 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 MELKQ14680 651 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 FFAR4Q5NUL3 377 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 GRTP1Q5TC63 336 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 ZNF790Q6PG37 636 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 FASTKD5Q7L8L6 764 aaKnown RBP3.31□□□□□ -1.88
RFC4-213ENST00000489028 ISCA2Q86U28 154 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 MCEMP1Q8IX19 187 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 ZFAND2BQ8WV99 257 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 SKA1Q96BD8 255 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 MOAP1Q96BY2 351 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 FAM81BQ96LP2 452 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 EGLN1Q9GZT9 426 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 HHATLQ9HCP6 504 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 ZNF71Q9NQZ8 489 aaPredicted RBP3.31□□□□□ -1.88
RFC4-213ENST00000489028 OLFML3Q9NRN5 406 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 C2orf42Q9NWW7 574 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 COQ3Q9NZJ6 369 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 SEC63Q9UGP8 760 aaKnown RBP3.31□□□□□ -1.88
RFC4-213ENST00000489028 PLAGL1Q9UM63 463 aa3.31□□□□□ -1.88
RFC4-213ENST00000489028 DNM1LO00429 736 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms