RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 HTR1BP28222 390 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 ARCN1P48444 511 aaKnown RBP19.07■□□□□ 0.64
CCM2-216ENST00000488727 POLD2P49005 469 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 CACNG1Q06432 222 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 STX3Q13277 289 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 FASTKD1Q53R41 847 aaKnown RBP19.07■□□□□ 0.64
CCM2-216ENST00000488727 ZNF542PQ5EBM4 170 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 SWT1Q5T5J6 900 aaKnown RBP19.07■□□□□ 0.64
CCM2-216ENST00000488727 GPRC6AQ5T6X5 926 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 DOK6Q6PKX4 331 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 ENPP7Q6UWV6 458 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 PARGQ86W56 976 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 CRLF3Q8IUI8 442 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 PHYKPLQ8IUZ5 450 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 OR56A4Q8NGH8 313 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 OR4L1Q8NH43 312 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 UTP4Q969X6 686 aaKnown RBP19.07■□□□□ 0.64
CCM2-216ENST00000488727 CCDC97Q96F63 343 aaPredicted RBP19.07■□□□□ 0.64
CCM2-216ENST00000488727 PDXPQ96GD0 296 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 MRPL40Q9NQ50 206 aaKnown RBP19.07■□□□□ 0.64
CCM2-216ENST00000488727 RXFP3Q9NSD7 469 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 GOLGA8TH3BQL2 631 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 PROCP04070 461 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 MYL2P10916 166 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 PTPN4P29074 926 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 HLA-BQ31612 363 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 GPR33Q49SQ1 333 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 STRA8Q7Z7C7 330 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 KCNMB4Q86W47 210 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 NXPE1Q8N323 547 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 DDHD1Q8NEL9 900 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 OR1E3Q8WZA6 343 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 TSACCQ96A04 125 aaPredicted RBP19.06■□□□□ 0.64
CCM2-216ENST00000488727 ERVMER34-1Q9H9K5 563 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 IL21RQ9HBE5 538 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 SNX15Q9NRS6 342 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 MARCH4Q9P2E8 410 aaPredicted RBP19.06■□□□□ 0.64
CCM2-216ENST00000488727 BAIAP2L1Q9UHR4 511 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 CRLS1Q9UJA2 301 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 SLC17A4Q9Y2C5 497 aa19.06■□□□□ 0.64
CCM2-216ENST00000488727 RIF1Q5UIP0 2472 aaKnown RBP19.06■□□□□ 0.64
CCM2-216ENST00000488727 CBX6O95503 412 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 TOP3BO95985 862 aaKnown RBP19.05■□□□□ 0.64
CCM2-216ENST00000488727 MPOP05164 745 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 SYPP08247 313 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 FGF3P11487 239 aaPredicted RBP19.05■□□□□ 0.64
CCM2-216ENST00000488727 KELP23276 732 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 SERPINB3P29508 390 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 TYK2P29597 1187 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 SEMA3AQ14563 771 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 PCLAFQ15004 111 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 ALG11Q2TAA5 492 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 CCDC153Q494R4 210 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 ADGRG6Q86SQ4 1221 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 PTCD3Q96EY7 689 aaKnown RBP19.05■□□□□ 0.64
CCM2-216ENST00000488727 ZDHHC5Q9C0B5 715 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 WWP1Q9H0M0 922 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 TRIM39Q9HCM9 518 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 ATXN10Q9UBB4 475 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 KLQ9UEF7 1012 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 PCYT1BQ9Y5K3 369 aaPredicted RBP19.05■□□□□ 0.64
CCM2-216ENST00000488727 PRSS38A1L453 326 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 PAMP19021 973 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 ACRV1P26436 265 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 SRP54P61011 504 aaKnown RBP19.05■□□□□ 0.64
CCM2-216ENST00000488727 ZNF423Q2M1K9 1284 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 C16orf46Q6P387 395 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 PRR23CQ6ZRP0 262 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 TAS2R42Q7RTR8 314 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 SERPINA9Q86WD7 417 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 ULK4Q96C45 1275 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 ELF4Q99607 663 aaPredicted RBP19.05■□□□□ 0.64
CCM2-216ENST00000488727 GTPBP2Q9BX10 602 aaKnown RBP19.05■□□□□ 0.64
CCM2-216ENST00000488727 OR2AG1Q9H205 316 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 TCEAL2Q9H3H9 227 aaPredicted RBP19.05■□□□□ 0.64
CCM2-216ENST00000488727 GAREM1Q9H706 876 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 DNAJC28Q9NX36 388 aa19.05■□□□□ 0.64
CCM2-216ENST00000488727 ZNF292O60281 2723 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 TNFRSF10CO14798 259 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 SCAMP1O15126 338 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 NME1P15531 152 aaKnown RBP19.04■□□□□ 0.64
CCM2-216ENST00000488727 CSRP3P50461 194 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 B4GALNT1Q00973 533 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 SHBQ15464 509 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 LDLRAP1Q5SW96 308 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 IL27RAQ6UWB1 636 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 CLEC14AQ86T13 490 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 LDB1Q86U70 411 aaPredicted RBP19.04■□□□□ 0.64
CCM2-216ENST00000488727 RBFAQ8N0V3 343 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 MINDY1Q8N5J2 469 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 NAT14Q8WUY8 206 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 STN1Q9H668 368 aaKnown RBP19.04■□□□□ 0.64
CCM2-216ENST00000488727 CATSPERZQ9NTU4 200 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 C20orf96Q9NUD7 363 aaPredicted RBP19.04■□□□□ 0.64
CCM2-216ENST00000488727 STK38LQ9Y2H1 464 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 CABIN1Q9Y6J0 2220 aa19.04■□□□□ 0.64
CCM2-216ENST00000488727 CD3EAPO15446 510 aaKnown RBP19.03■□□□□ 0.64
CCM2-216ENST00000488727 GFRA3O60609 400 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 CSF2P04141 144 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 SERPINE1P05121 402 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms