RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 TTLQ8NG68 377 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 SPATA18Q8TC71 538 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 FAR1Q8WVX9 515 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 COPS5Q92905 334 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 NXNL1Q96CM4 212 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 OMA1Q96E52 524 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 AURKBQ96GD4 344 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 TCTN2Q96GX1 697 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 SCLYQ96I15 445 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZNF578Q96N58 590 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 MUS81Q96NY9 551 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 MCEEQ96PE7 176 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 P2RX7Q99572 595 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 FEM1AQ9BSK4 669 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 CCDC32Q9BV29 185 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 KIFC3Q9BVG8 833 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 SLC12A9Q9BXP2 914 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 MRPL4Q9BYD3 311 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 ALOXE3Q9BYJ1 711 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 FAM49AQ9H0Q0 323 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 RSAD1Q9HA92 442 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 PRDM8Q9NQV8 689 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 PLSCR3Q9NRY6 295 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 ASNSD1Q9NWL6 643 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 TMEFF2Q9UIK5 374 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 PDE10AQ9Y233 779 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 SF3B6Q9Y3B4 125 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 CSNK1G3Q9Y6M4 447 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 DNAJC25-GNG10A0A024R161 153 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 TCRBV5S2A0A599 114 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 BCLAF3A2AJT9 711 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 LINC00862A6NCI5 91 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 CLDN24A6NM45 220 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 PDHXO00330 501 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 NEMP1O14524 444 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 NRP1O14786 923 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 KCNQ2O43526 872 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 SGTAO43765 313 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 DFNA5O60443 496 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 MRPS14O60783 128 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZNF254O75437 659 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 INMTO95050 263 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 NTSR2O95665 410 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 LDLRP01130 860 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 CALCAP01258 141 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 APOA1P02647 267 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 MPOP05164 745 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 ALPLP05186 524 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 CHRNGP07510 517 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 CYP19A1P11511 503 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 TFEBP19484 476 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 ERP29P30040 261 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 LRPAP1P30533 357 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 OXTRP30559 389 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 GGT5P36269 586 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 GP5P40197 560 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 GARSP41250 739 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 PRELPP51888 382 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 SLC7A2P52569 658 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 GSTO1P78417 241 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 POU6F2P78424 691 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 MVKQ03426 396 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 GBE1Q04446 702 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 CYP24A1Q07973 514 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 FOXM1Q08050 763 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 MAP4K2Q12851 820 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 IKQ13123 557 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 TNK1Q13470 666 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 DAG1Q14118 895 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 FRG1Q14331 258 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 STARD3Q14849 445 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 MFSD13AQ14CX5 517 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 PLCL1Q15111 1095 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 STK11Q15831 433 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 PSMD5Q16401 504 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 HADHQ16836 314 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZNF404Q494X3 552 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 GRTP1Q5TC63 336 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 PXDC1Q5TGL8 231 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 PIK3R6Q5UE93 754 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 SUSD4Q5VX71 490 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 LIPMQ5VYY2 423 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 TMEM236Q5W0B7 351 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 TTC23Q5W5X9 447 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 TIGD3Q6B0B8 471 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 TAF2Q6P1X5 1199 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 B3GNT9Q6UX72 402 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 CREB3L2Q70SY1 520 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 BEND5Q7L4P6 421 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 OTOP1Q7RTM1 612 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 PIGZQ86VD9 579 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 ARFGAP1Q8N6T3 406 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 C2orf69Q8N8R5 385 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 KDM1BQ8NB78 822 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 LRRC20Q8TCA0 184 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 FRS2Q8WU20 508 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 SLC7A6Q92536 515 aa4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.69□□□□□ -1.66
CDC42BPA-213ENST00000488131 MFSD3Q96ES6 412 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms