RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 HGSO14964 777 aaPredicted RBP23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 OR1I1O60431 355 aa23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 AMD1P17707 334 aa23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 TRA2AQ13595 282 aaKnown RBP eCLIP23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 PLCL1Q15111 1095 aa23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 WDR74Q6RFH5 385 aaPredicted RBP23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 C19orf48Q6RUI8 117 aa23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 CES3Q6UWW8 571 aa23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 LDB1Q86U70 411 aaPredicted RBP23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 RBM12BQ8IXT5 1001 aaKnown RBP23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 OTUD6BQ8N6M0 293 aa23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 HNRNPLLQ8WVV9 542 aaKnown RBP23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 RSC1A1Q92681 617 aa23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 TREX1Q9NSU2 369 aa23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 MARCH4Q9P2E8 410 aaPredicted RBP23.16■■□□□ 1.3
RHBDD3-205ENST00000488106 FANCGO15287 622 aa23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 RRP8O43159 456 aaKnown RBP23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 AP2A2O94973 939 aa23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 MLLT3P42568 568 aaPredicted RBP23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 PREPP48147 710 aa23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 GFERP55789 205 aa23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 LYPLAL1Q5VWZ2 237 aa23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 CASC4Q6P4E1 433 aa23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 CAND1Q86VP6 1230 aaKnown RBP23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 MPP5Q8N3R9 675 aa23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 TTC1Q99614 292 aa23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 MRM3Q9HC36 420 aaKnown RBP23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 ASIC3Q9UHC3 531 aa23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 ANAPC5Q9UJX4 755 aa23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 SOX13Q9UN79 622 aa23.15■■□□□ 1.3
RHBDD3-205ENST00000488106 MN1Q10571 1320 aaPredicted RBP23.14■■□□□ 1.3
RHBDD3-205ENST00000488106 C17orf113A0A1B0GUU1 675 aa23.14■■□□□ 1.29
RHBDD3-205ENST00000488106 CCL4P13236 92 aa23.14■■□□□ 1.29
RHBDD3-205ENST00000488106 CSTF2P33240 577 aaKnown RBP eCLIP23.14■■□□□ 1.29
RHBDD3-205ENST00000488106 CAPZBP47756 277 aa23.14■■□□□ 1.29
RHBDD3-205ENST00000488106 AARS2Q5JTZ9 985 aaKnown RBP23.14■■□□□ 1.29
RHBDD3-205ENST00000488106 CERS6Q6ZMG9 384 aa23.14■■□□□ 1.29
RHBDD3-205ENST00000488106 LRRC69Q6ZNQ3 347 aa23.14■■□□□ 1.29
RHBDD3-205ENST00000488106 CLEC14AQ86T13 490 aa23.14■■□□□ 1.29
RHBDD3-205ENST00000488106 CREG2Q8IUH2 290 aa23.14■■□□□ 1.29
RHBDD3-205ENST00000488106 KLHL7Q8IXQ5 586 aa23.14■■□□□ 1.29
RHBDD3-205ENST00000488106 ZNF248Q8NDW4 579 aa23.14■■□□□ 1.29
RHBDD3-205ENST00000488106 MFSD3Q96ES6 412 aa23.14■■□□□ 1.29
RHBDD3-205ENST00000488106 KIFC1Q9BW19 673 aa23.14■■□□□ 1.29
RHBDD3-205ENST00000488106 A0A087WV48 116 aa23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 QSOX1O00391 747 aa23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 CD3EAPO15446 510 aaKnown RBP23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 FTH1P02794 183 aa23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 ITPKBP27987 946 aa23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 SLC5A2P31639 672 aa23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 BOP1Q14137 746 aaKnown RBP23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 ZNF658BQ4V348 819 aaPredicted RBP23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 FAM129CQ86XR2 697 aa23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 PLXDC1Q8IUK5 500 aa23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 AGBL5Q8NDL9 886 aa23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 KCNE4Q8WWG9 221 aa23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 ELMO1Q92556 727 aa23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 SGSM3Q96HU1 749 aa23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 SERPINB12Q96P63 405 aa23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 TGM7Q96PF1 710 aa23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 TRIM56Q9BRZ2 755 aaKnown RBP23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 XAB2Q9HCS7 855 aaKnown RBP23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 SAMD15Q9P1V8 674 aa23.13■■□□□ 1.29
RHBDD3-205ENST00000488106 PRAMEF10O60809 474 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 VAPBO95292 243 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 OR56A5P0C7T3 313 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 ITGB6P18564 788 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 PDHA2P29803 388 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 PPARGP37231 505 aaPredicted RBP23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 PTK6Q13882 451 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 KRT33BQ14525 404 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 BRD3Q15059 726 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 COL28A1Q2UY09 1125 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 SYTL3Q4VX76 610 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 CAPRIN2Q6IMN6 1127 aaKnown RBP23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 ZNF449Q6P9G9 518 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 NAPRTQ6XQN6 538 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 PPIL6Q8IXY8 311 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 MCUQ8NE86 351 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 USP7Q93009 1102 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 OR52A5Q9H2C5 316 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 PDP2Q9P2J9 529 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 PCYOX1Q9UHG3 505 aa23.12■■□□□ 1.29
RHBDD3-205ENST00000488106 EFCAB7A8K855 629 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 GOLGA8KD6RF30 607 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 GOLGA8TH3BQL2 631 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 IFRD1O00458 451 aaPredicted RBP23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 CAPN5O15484 640 aaPredicted RBP23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 GSTM1P09488 218 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 FGF3P11487 239 aaPredicted RBP23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 MLNP12872 115 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 ARNTP27540 789 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 ABCG1P45844 678 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 LEPRP48357 1165 aaKnown RBP23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 TTPAP49638 278 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 GSTM4Q03013 218 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 IRGCQ6NXR0 463 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 SPACA3Q8IXA5 215 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 NAT8LQ8N9F0 302 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 WDR70Q9NW82 654 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms