RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 GPALPP1Q8IXQ4 340 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 LMNTD2Q8IXW0 634 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 KBTBD8Q8NFY9 601 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 TRPC4APQ8TEL6 797 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 OMA1Q96E52 524 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 ZNF582Q96NG8 517 aaPredicted RBP3.6□□□□□ -1.83
SMC4-219ENST00000487747 OLFML3Q9NRN5 406 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 RNF186Q9NXI6 227 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 LRWD1Q9UFC0 647 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 CSAG2Q9Y5P2 127 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 LRRFIP2Q9Y608 721 aaKnown RBP3.6□□□□□ -1.83
SMC4-219ENST00000487747 TMEM8BA6NDV4 472 aa3.59□□□□□ -1.83
SMC4-219ENST00000487747 DAB1O75553 588 aa3.59□□□□□ -1.83
SMC4-219ENST00000487747 MSH2P43246 934 aa3.59□□□□□ -1.83
SMC4-219ENST00000487747 GALCP54803 685 aa3.59□□□□□ -1.83
SMC4-219ENST00000487747 SLC8A3P57103 927 aa3.59□□□□□ -1.83
SMC4-219ENST00000487747 LGALS3BPQ08380 585 aa3.59□□□□□ -1.83
SMC4-219ENST00000487747 GRAPQ13588 217 aa3.59□□□□□ -1.83
SMC4-219ENST00000487747 KLC3Q6P597 504 aa3.59□□□□□ -1.83
SMC4-219ENST00000487747 CLEC17AQ6ZS10 378 aa3.59□□□□□ -1.83
SMC4-219ENST00000487747 TPRG1Q6ZUI0 275 aa3.59□□□□□ -1.83
SMC4-219ENST00000487747 DCLK2Q8N568 766 aa3.59□□□□□ -1.83
SMC4-219ENST00000487747 FAM120CQ9NX05 1096 aaKnown RBP3.59□□□□□ -1.83
SMC4-219ENST00000487747 DBNLQ9UJU6 430 aaKnown RBP3.59□□□□□ -1.83
SMC4-219ENST00000487747 SLC13A4Q9UKG4 626 aa3.59□□□□□ -1.83
SMC4-219ENST00000487747 KLK13Q9UKR3 277 aa3.59□□□□□ -1.83
SMC4-219ENST00000487747 SLC7A7Q9UM01 511 aa3.59□□□□□ -1.83
SMC4-219ENST00000487747 NDUFS3O75489 264 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 CLDN1O95832 211 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 PIK3CAP42336 1068 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 PSMC4P43686 418 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 GPR143P51810 404 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 CDR2Q01850 454 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 GPR17Q13304 367 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 FBXL16Q8N461 479 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 OR4C3Q8NH37 302 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 HPSE2Q8WWQ2 592 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 HSD17B8Q92506 261 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 SGCDQ92629 289 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 DAZLQ92904 295 aaKnown RBP3.58□□□□□ -1.84
SMC4-219ENST00000487747 FOXN4Q96NZ1 517 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 PIGQQ9BRB3 760 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 DENND2DQ9H6A0 471 aaPredicted RBP3.58□□□□□ -1.84
SMC4-219ENST00000487747 PRR34Q9NV39 138 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 CRYL1Q9Y2S2 319 aa3.58□□□□□ -1.84
SMC4-219ENST00000487747 A0A1W2PPH5 198 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 A6NLC8 198 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 H1F0P07305 194 aaKnown RBP3.57□□□□□ -1.84
SMC4-219ENST00000487747 PPP2R2BQ00005 443 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 SOS1Q07889 1333 aaPredicted RBP3.57□□□□□ -1.84
SMC4-219ENST00000487747 GLIPR1L2Q4G1C9 344 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 FASTKD1Q53R41 847 aaKnown RBP3.57□□□□□ -1.84
SMC4-219ENST00000487747 BSPRYQ5W0U4 402 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 ZDHHC20Q5W0Z9 365 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 ZNF343Q6P1L6 599 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 PAQR6Q6TCH4 344 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 GLDNQ6ZMI3 551 aaPredicted RBP3.57□□□□□ -1.84
SMC4-219ENST00000487747 ABCA7Q8IZY2 2146 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 NGEFQ8N5V2 710 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 FRMD1Q8N878 549 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 MAGED4Q96JG8 741 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 SLC22A12Q96S37 553 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 MYADMQ96S97 322 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 GAD1Q99259 594 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 SETD4Q9NVD3 440 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 LIMA1Q9UHB6 759 aaKnown RBP3.57□□□□□ -1.84
SMC4-219ENST00000487747 RIPK3Q9Y572 518 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 KCNE2Q9Y6J6 123 aa3.57□□□□□ -1.84
SMC4-219ENST00000487747 MEX3AA1L020 520 aaKnown RBP3.56□□□□□ -1.84
SMC4-219ENST00000487747 OGG1O15527 345 aa3.56□□□□□ -1.84
SMC4-219ENST00000487747 KHDRBS3O75525 346 aaKnown RBP3.56□□□□□ -1.84
SMC4-219ENST00000487747 ZSCAN5DPP0CG00 497 aa3.56□□□□□ -1.84
SMC4-219ENST00000487747 ATP1A3P13637 1013 aa3.56□□□□□ -1.84
SMC4-219ENST00000487747 PPM1FP49593 454 aaPredicted RBP3.56□□□□□ -1.84
SMC4-219ENST00000487747 CASP6P55212 293 aa3.56□□□□□ -1.84
SMC4-219ENST00000487747 KRTAP10-8P60410 259 aa3.56□□□□□ -1.84
SMC4-219ENST00000487747 RPS18P62269 152 aaKnown RBP3.56□□□□□ -1.84
SMC4-219ENST00000487747 NIPAL4Q0D2K0 466 aa3.56□□□□□ -1.84
SMC4-219ENST00000487747 TEAD2Q15562 447 aa3.56□□□□□ -1.84
SMC4-219ENST00000487747 PSRC1Q6PGN9 363 aaPredicted RBP3.56□□□□□ -1.84
SMC4-219ENST00000487747 TRIM65Q6PJ69 517 aa3.56□□□□□ -1.84
SMC4-219ENST00000487747 CDC20BQ86Y33 519 aa3.56□□□□□ -1.84
SMC4-219ENST00000487747 ARHGAP12Q8IWW6 846 aa3.56□□□□□ -1.84
SMC4-219ENST00000487747 ELMOD3Q96FG2 381 aa3.56□□□□□ -1.84
SMC4-219ENST00000487747 ZNF414Q96IQ9 312 aa3.56□□□□□ -1.84
SMC4-219ENST00000487747 TRAF4Q9BUZ4 470 aaPredicted RBP3.56□□□□□ -1.84
SMC4-219ENST00000487747 P2RY12Q9H244 342 aa3.56□□□□□ -1.84
SMC4-219ENST00000487747 ACKR4Q9NPB9 350 aa3.56□□□□□ -1.84
SMC4-219ENST00000487747 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.56□□□□□ -1.84
SMC4-219ENST00000487747 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.55□□□□□ -1.84
SMC4-219ENST00000487747 ATP6V0E1O15342 81 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 HIST1H2ABP04908 130 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 CAPN2P17655 700 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 HIST1H2ADP20671 130 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 B3GALT5-AS1P59052 145 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 COX10Q12887 443 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 DRP2Q13474 957 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 MED22Q15528 200 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 TBCEQ15813 527 aaPredicted RBP3.55□□□□□ -1.84
SMC4-219ENST00000487747 KRTAP13-3Q3SY46 172 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms