RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 SDHDO14521 159 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 PLRG1O43660 514 aaKnown RBP9.26□□□□□ -0.93
SF3B1-211ENST00000487698 ATG13O75143 517 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 RNASEH2AO75792 299 aaKnown RBP9.26□□□□□ -0.93
SF3B1-211ENST00000487698 ATP5HO75947 161 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 TM7SF2O76062 418 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 C8GP07360 202 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 ENO2P09104 434 aaPredicted RBP9.26□□□□□ -0.93
SF3B1-211ENST00000487698 VCLP18206 1134 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 BTKQ06187 659 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 HSPA14Q0VDF9 509 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 SP140Q13342 867 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 CCINQ13939 588 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 TBCCQ15814 346 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 LSM12Q3MHD2 195 aaKnown RBP9.26□□□□□ -0.93
SF3B1-211ENST00000487698 CDKL4Q5MAI5 379 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 KANK2Q63ZY3 851 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 TRIM74Q86UV6 250 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 AFAP1L2Q8N4X5 818 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 PLA2G15Q8NCC3 412 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 TRPC4APQ8TEL6 797 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 ASZ1Q8WWH4 475 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 ASB11Q8WXH4 323 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 ELMO1Q92556 727 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 GLMNQ92990 594 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 RHBDF1Q96CC6 855 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 MSANTD3Q96H12 275 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 COX14Q96I36 57 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 CCM2Q9BSQ5 444 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 CCDC28BQ9BUN5 200 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 SLC6A17Q9H1V8 727 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 WDR55Q9H6Y2 383 aaPredicted RBP9.26□□□□□ -0.93
SF3B1-211ENST00000487698 MEAF6Q9HAF1 191 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 MID1IP1Q9NPA3 183 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 SLC2A4RGQ9NR83 387 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 GULP1Q9UBP9 304 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 EIF2B4Q9UI10 523 aaKnown RBP9.26□□□□□ -0.93
SF3B1-211ENST00000487698 GOLGA8QA0A0J9YX86 632 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 SLC5A10A0PJK1 596 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 GOLGA8OA6NCC3 632 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 GOLGA8NF8WBI6 632 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 GFYI3L273 518 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 TAPBPO15533 448 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 S100BP04271 92 aaPredicted RBP9.26□□□□□ -0.93
SF3B1-211ENST00000487698 AOC1P19801 751 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 TEAD1P28347 426 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 EPHA3P29320 983 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 CDKL1Q00532 357 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 UBAP2LQ14157 1087 aaKnown RBP9.26□□□□□ -0.93
SF3B1-211ENST00000487698 WSCD2Q2TBF2 565 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 C18orf21Q32NC0 220 aaPredicted RBP9.26□□□□□ -0.93
SF3B1-211ENST00000487698 TMEM259Q4ZIN3 620 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 FAM219BQ5XKK7 198 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 CLEC6AQ6EIG7 209 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 METTL2BQ6P1Q9 378 aaKnown RBP9.26□□□□□ -0.93
SF3B1-211ENST00000487698 PNCKQ6P2M8 343 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 XKR5Q6UX68 686 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 TMPRSS6Q8IU80 811 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 ESAMQ96AP7 390 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 SLC7A6OSQ96CW6 309 aaPredicted RBP9.26□□□□□ -0.93
SF3B1-211ENST00000487698 HIC2Q96JB3 615 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 TMEM79Q9BSE2 394 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 SLC12A9Q9BXP2 914 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 LRMDAQ9H2I8 198 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 ZNF385DQ9H6B1 395 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 TRIM39Q9HCM9 518 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 SEMA4BQ9NPR2 832 aaPredicted RBP9.26□□□□□ -0.93
SF3B1-211ENST00000487698 FBXL12Q9NXK8 326 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 ATXN10Q9UBB4 475 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 LNPEPQ9UIQ6 1025 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 ZNF225Q9UK10 706 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 SCML1Q9UN30 329 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 TRIM33Q9UPN9 1127 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 ZFR2Q9UPR6 939 aaKnown RBP9.26□□□□□ -0.93
SF3B1-211ENST00000487698 PDE10AQ9Y233 779 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 TNPO3Q9Y5L0 923 aaKnown RBP9.26□□□□□ -0.93
SF3B1-211ENST00000487698 PRR5-ARHGAP8B1AHC4 643 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 E9PBE3 544 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 MYO1CO00159 1063 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 AZIN1O14977 448 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 SLC16A5O15375 505 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 KLHL41O60662 606 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 HNRNPCL1O60812 293 aaKnown RBP9.25□□□□□ -0.93
SF3B1-211ENST00000487698 SKAP2O75563 359 aaPredicted RBP9.25□□□□□ -0.93
SF3B1-211ENST00000487698 PCDH8O95206 1070 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 MATN4O95460 622 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 ESRRBO95718 433 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 MLYCDO95822 493 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 DNTTP04053 509 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 GSTM1P09488 218 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 SRFP11831 508 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 FOXA1P55317 472 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 ARHGAP8P85298 464 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 GSTM4Q03013 218 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 FGL2Q14314 439 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 FBXO43Q4G163 708 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 SULT1C3Q6IMI6 304 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 TMEM220Q6QAJ8 160 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 ACAD11Q709F0 780 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 ZNF547Q8IVP9 402 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms