RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 KIR3DX1Q9H7L2 352 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 ZBTB20Q9HC78 741 aaPredicted RBP14.94□□□□□ -0.02
MCF2L-228ENST00000487354 ANO10Q9NW15 660 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 POMT2Q9UKY4 750 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 PCDHGA10Q9Y5H3 936 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 SVILO95425 2214 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 OR6C74A6NCV1 312 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 SLC9B1P1A6NJY1 282 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 E2F3O00716 465 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 UGT1A9O60656 530 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 NDST3O95803 873 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 UGT1A6P19224 532 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 UGT1A1P22309 533 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 UGT1A4P22310 534 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 ELAVL4P26378 380 aaKnown RBP14.93□□□□□ -0.02
MCF2L-228ENST00000487354 GTF2H3Q13889 308 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 HADHQ16836 314 aaKnown RBP14.93□□□□□ -0.02
MCF2L-228ENST00000487354 CUZD1Q86UP6 607 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 TTC13Q8NBP0 860 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 KCTD6Q8NC69 237 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 BRSK1Q8TDC3 778 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 RMDN2Q96LZ7 410 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 AGAP3Q96P47 875 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 RNF157Q96PX1 679 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 WWP1Q9H0M0 922 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 ZNF552Q9H707 407 aaPredicted RBP14.93□□□□□ -0.02
MCF2L-228ENST00000487354 UGT1A7Q9HAW7 530 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 UGT1A10Q9HAW8 530 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 UGT1A8Q9HAW9 530 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 SOHLH2Q9NX45 425 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 CHMP5Q9NZZ3 219 aa14.93□□□□□ -0.02
MCF2L-228ENST00000487354 A0A087X0T9 212 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 C3orf70A6NLC5 250 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-228ENST00000487354 TMEM150CB9EJG8 249 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 H3BMH7 237 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 MYO1FO00160 1098 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 SGTAO43765 313 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 MSL3P1P0C860 447 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 FAM228BP0C875 321 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 PBLDP30039 288 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-228ENST00000487354 SSR1P43307 286 aaKnown RBP14.92□□□□□ -0.02
MCF2L-228ENST00000487354 RRADP55042 308 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 GPRC6AQ5T6X5 926 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 SLC9A4Q6AI14 798 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 TMEM220Q6QAJ8 160 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 FAM151BQ6UXP7 276 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 B4GALNT4Q76KP1 1039 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 LILRA3Q8N6C8 439 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-228ENST00000487354 GDAP1Q8TB36 358 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 CLIP3Q96DZ5 547 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 C12orf66Q96MD2 445 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 NAP1L5Q96NT1 182 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-228ENST00000487354 XPO4Q9C0E2 1151 aaKnown RBP14.92□□□□□ -0.02
MCF2L-228ENST00000487354 ACTR5Q9H9F9 607 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-228ENST00000487354 CBX8Q9HC52 389 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 IL17CQ9P0M4 197 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 SRPK3Q9UPE1 567 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 CSAG2Q9Y5P2 127 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 DNMT3AQ9Y6K1 912 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-228ENST00000487354 DCHS2Q6V1P9 2916 aa14.92□□□□□ -0.02
MCF2L-228ENST00000487354 F5H423 210 aaPredicted RBP14.91□□□□□ -0.02
MCF2L-228ENST00000487354 CNOT3O75175 753 aaKnown RBP14.91□□□□□ -0.02
MCF2L-228ENST00000487354 PROSCO94903 275 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 ST6GAL1P15907 406 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 POLR2CP19387 275 aaPredicted RBP14.91□□□□□ -0.02
MCF2L-228ENST00000487354 KDELR1P24390 212 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 CD68P34810 354 aaPredicted RBP14.91□□□□□ -0.02
MCF2L-228ENST00000487354 FOXL2P58012 376 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 XRCC4Q13426 336 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 MYBPC3Q14896 1274 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 DCAF10Q5QP82 559 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 TMTC4Q5T4D3 741 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 KDELC1Q6UW63 502 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 NPNTQ6UXI9 565 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 Q6ZS92 163 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 UBE2Q2Q8WVN8 375 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 ZFPM2Q8WW38 1151 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 SGSM3Q96HU1 749 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 PITPNM3Q9BZ71 974 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 GLOD4Q9HC38 313 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 SMOXQ9NWM0 555 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 UBP1Q9NZI7 540 aa14.91□□□□□ -0.02
MCF2L-228ENST00000487354 G3BP2Q9UN86 482 aaKnown RBP14.91□□□□□ -0.02
MCF2L-228ENST00000487354 A0A1B0GTH6 734 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 LOC285095A0A1B0GVY8 99 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 HCRTR1O43613 425 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 PMPCBO75439 489 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 HLA-DPA1P20036 260 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 OTX2P32243 289 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 SPAM1P38567 509 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 CHRNA4P43681 627 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 LMAN1P49257 510 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 AP1B1Q10567 949 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 LDLRAP1Q5SW96 308 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 CLEC17AQ6ZS10 378 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 RAB43Q86YS6 212 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 SLC34A3Q8N130 599 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 GALNT16Q8N428 558 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 ST6GALNAC3Q8NDV1 305 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 MARVELD3Q96A59 401 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms