RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CETN1Q12798 172 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 CYP2A13Q16696 494 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 FIGNQ5HY92 759 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 TMTC4Q5T4D3 741 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 AGAP9Q5VTM2 703 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 CES4AQ5XG92 561 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 ISLR2Q6UXK2 745 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 TMEM151BQ8IW70 566 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 RAVER1Q8IY67 606 aaKnown RBP11.34□□□□□ -0.59
TRIM56-204ENST00000487252 CCDC185Q8N715 623 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 OR1L3Q8NH93 324 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 IQCDQ96DY2 449 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 MAGEB10Q96LZ2 347 aaPredicted RBP11.34□□□□□ -0.59
TRIM56-204ENST00000487252 PSKH2Q96QS6 385 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 ERGIC2Q96RQ1 377 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 WDR24Q96S15 920 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 DNAJC7Q99615 494 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 C17orf62Q9BQA9 187 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 RIOK2Q9BVS4 552 aaKnown RBP11.34□□□□□ -0.59
TRIM56-204ENST00000487252 LHPPQ9H008 270 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 SYTL2Q9HCH5 934 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 UBE2TQ9NPD8 197 aaPredicted RBP11.34□□□□□ -0.59
TRIM56-204ENST00000487252 ABHD10Q9NUJ1 306 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 SLC23A2Q9UGH3 650 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 FBXL4Q9UKA2 621 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 CAPN11Q9UMQ6 739 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 UBA6A0AVT1 1052 aaPredicted RBP11.33□□□□□ -0.6
TRIM56-204ENST00000487252 SOWAHDA6NJG2 315 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 SLC9B1P1A6NJY1 282 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 CHUKO15111 745 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 KLHL18O94889 574 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 CPP00450 1065 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 CRYABP02511 175 aaKnown RBP11.33□□□□□ -0.6
TRIM56-204ENST00000487252 CD63P08962 238 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 AGXTP21549 392 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 HOXC12P31275 282 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 TNFSF10P50591 281 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 UBXN1Q04323 297 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 LRRC63Q05C16 580 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 DSG2Q14126 1118 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 LRRC66Q68CR7 880 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 MRPL14Q6P1L8 145 aaKnown RBP11.33□□□□□ -0.6
TRIM56-204ENST00000487252 KLHL35Q6PF15 583 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 NCCRP1Q6ZVX7 275 aaPredicted RBP11.33□□□□□ -0.6
TRIM56-204ENST00000487252 ENOSF1Q7L5Y1 443 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 PHC2Q8IXK0 858 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 PAF1Q8N7H5 531 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 CA5BP1Q8WTZ4 195 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 NTAN1Q96AB6 310 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 C18orf8Q96DM3 657 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 TUBGCP2Q9BSJ2 902 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 OSGEPL1Q9H4B0 414 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 ATXN10Q9UBB4 475 aa11.33□□□□□ -0.6
TRIM56-204ENST00000487252 TRAV17A0A0B4J275 112 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 OR5K3A6NET4 321 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 FADS2P1A8MWK0 482 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 GPR89AB7ZAQ6 455 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 VEGFDO43915 354 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 ALOX12BO75342 701 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 SLCO2B1O94956 709 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 FGFR1OPO95684 399 aaKnown RBP11.32□□□□□ -0.6
TRIM56-204ENST00000487252 GPR89BP0CG08 455 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 UNGP13051 313 aaPredicted RBP11.32□□□□□ -0.6
TRIM56-204ENST00000487252 ZNF8P17098 575 aaPredicted RBP11.32□□□□□ -0.6
TRIM56-204ENST00000487252 UGT1A4P22310 534 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 PCSK6P29122 969 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 FOXL2P58012 376 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 RFTN1Q14699 578 aaPredicted RBP11.32□□□□□ -0.6
TRIM56-204ENST00000487252 SMYD5Q6GMV2 418 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 USP45Q70EL2 814 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 B4GALNT4Q76KP1 1039 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 PYROXD2Q8N2H3 581 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 OR8K1Q8NGG5 319 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 THAP3Q8WTV1 239 aaPredicted RBP11.32□□□□□ -0.6
TRIM56-204ENST00000487252 CPLX3Q8WVH0 158 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 PIH1D2Q8WWB5 315 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 CENPIQ92674 756 aaPredicted RBP11.32□□□□□ -0.6
TRIM56-204ENST00000487252 DMRTA2Q96SC8 542 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 CINPQ9BW66 212 aaPredicted RBP11.32□□□□□ -0.6
TRIM56-204ENST00000487252 TLR10Q9BXR5 811 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 FANCEQ9HB96 536 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 FAM207AQ9NSI2 230 aaPredicted RBP11.32□□□□□ -0.6
TRIM56-204ENST00000487252 GPATCH2LQ9NWQ4 482 aa11.32□□□□□ -0.6
TRIM56-204ENST00000487252 TTC24A2A3L6 582 aaPredicted RBP11.31□□□□□ -0.6
TRIM56-204ENST00000487252 CCDC66A2RUB6 948 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 PDZK1P1A8MUH7 402 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 SOCS6O14544 535 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 ADAM10O14672 748 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 ZNF749O43361 778 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 PRAMEF2O60811 474 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 CTAG2O75638 210 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 ZRANB2O95218 330 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRIM56-204ENST00000487252 PGLSO95336 258 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 HOXD4P09016 255 aaPredicted RBP11.31□□□□□ -0.6
TRIM56-204ENST00000487252 HBQ1P09105 142 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 ZNF30P17039 623 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 CYP2A7P20853 494 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 MMP11P24347 488 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 DNASE1P24855 282 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 RPL10P27635 214 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms