RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 TBC1D16Q8TBP0 767 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 HM13Q8TCT9 377 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 BICD2Q8TD16 824 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 TRPC4APQ8TEL6 797 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 METTL2AQ96IZ6 378 aaKnown RBP4.01□□□□□ -1.77
PTCD3-216ENST00000487043 RTN4RQ9BZR6 473 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 DENND2DQ9H6A0 471 aaPredicted RBP4.01□□□□□ -1.77
PTCD3-216ENST00000487043 TASP1Q9H6P5 420 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 ESRP2Q9H6T0 727 aaKnown RBP4.01□□□□□ -1.77
PTCD3-216ENST00000487043 ADARB2Q9NS39 739 aaKnown RBP4.01□□□□□ -1.77
PTCD3-216ENST00000487043 TMEM51Q9NW97 253 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 HAO2Q9NYQ3 351 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 CRNNQ9UBG3 495 aaPredicted RBP4.01□□□□□ -1.77
PTCD3-216ENST00000487043 DNAJB4Q9UDY4 337 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 POLLQ9UGP5 575 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 HACL1Q9UJ83 578 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 OSGIN1Q9UJX0 560 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 TTC7AQ9ULT0 858 aaPredicted RBP4.01□□□□□ -1.77
PTCD3-216ENST00000487043 PCDHGA5Q9Y5G8 931 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 C10orf71Q711Q0 1435 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 A0A1B0GUL6 1792 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 AKAP11Q9UKA4 1901 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 ARAP2Q8WZ64 1704 aa4.01□□□□□ -1.77
PTCD3-216ENST00000487043 FLT1P17948 1338 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 PDS5AQ29RF7 1337 aaKnown RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 RAD50Q92878 1312 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 AK9Q5TCS8 1911 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 A0A0G2JLW4 131 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 KANSL1LA0AUZ9 987 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 MAGEB17A8MXT2 336 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 KCNU1A8MYU2 1149 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 M0QZ24 198 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 MDM4O15151 490 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 SMAD9O15198 467 aaKnown RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 SPRY1O43609 319 aaPredicted RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 ATG13O75143 517 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 SLCO2B1O94956 709 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 TGDSO95455 350 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 EGFP01133 1207 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 ATP5BP06576 529 aaKnown RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 DPEP1P16444 411 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 PRLRP16471 622 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 GJA1P17302 382 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 MAOAP21397 527 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 UBA1P22314 1058 aaKnown RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 DNASE1P24855 282 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 PTAFRP25105 342 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 CCR10P46092 362 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 COMPP49747 757 aaPredicted RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 ARSEP51690 589 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 SELENOVP59797 346 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 BFSP1Q12934 665 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 RALGDSQ12967 914 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 GRIK2Q13002 908 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 TNIP1Q15025 636 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 DAZAP2Q15038 168 aaPredicted RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 SUPT20HL1Q3ZLR7 823 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 MCMDC2Q4G0Z9 681 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 COLEC12Q5KU26 742 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 CST9LP1Q5W188 147 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 TMEM211Q6ICI0 200 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 SLC2A7Q6PXP3 512 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 B3GNT6Q6ZMB0 384 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 MON1BQ7L1V2 547 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 SHFQ7M4L6 423 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 CACNA2D4Q7Z3S7 1137 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 HAUS6Q7Z4H7 955 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 YTHDF3Q7Z739 585 aaKnown RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 LDB1Q86U70 411 aaPredicted RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 IQCHQ86VS3 1027 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 METTL23Q86XA0 190 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 IQCA1Q86XH1 822 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 DSELQ8IZU8 1212 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 RBM15BQ8NDT2 890 aaKnown RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 TRIB2Q92519 343 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 LINC00615Q96LM1 132 aaPredicted RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 APOLD1Q96LR9 279 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 ZNF830Q96NB3 372 aaPredicted RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 RAB3IPQ96QF0 476 aaPredicted RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 DDOQ99489 341 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 SPATC1LQ9H0A9 340 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 IL25Q9H293 177 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 KCNN2Q9H2S1 579 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 SLCO5A1Q9H2Y9 848 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 MMP27Q9H306 513 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 R3HDMLQ9H3Y0 253 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 CD209Q9NNX6 404 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 PIH1D3Q9NQM4 214 aaKnown RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 PFDN4Q9NQP4 134 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 ARGLU1Q9NWB6 273 aaPredicted RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 TAS2R14Q9NYV8 317 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 OR6C3Q9NZP0 311 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 TUBE1Q9UJT0 475 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 ZSCAN21Q9Y5A6 473 aaPredicted RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 SEC23IPQ9Y6Y8 1000 aaKnown RBP4□□□□□ -1.77
PTCD3-216ENST00000487043 MED23Q9ULK4 1368 aa4□□□□□ -1.77
PTCD3-216ENST00000487043 SALL1Q9NSC2 1324 aa3.99□□□□□ -1.77
PTCD3-216ENST00000487043 LRRC37AA6NMS7 1700 aa3.99□□□□□ -1.77
PTCD3-216ENST00000487043 A0A0D9SFI3 127 aa3.99□□□□□ -1.77
PTCD3-216ENST00000487043 CGB1A6NKQ9 187 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms