RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 ZNF669Q96BR6 464 aaPredicted RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 NXPE2Q96DL1 559 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 STAMBPL1Q96FJ0 436 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 TMEM74Q96NL1 305 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 BIRC8Q96P09 236 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 INSM2Q96T92 566 aaPredicted RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 SLC38A3Q99624 504 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 EBNA1BP2Q99848 306 aaKnown RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 WDR83Q9BRX9 315 aaKnown RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 KCNK4Q9NYG8 393 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 OGFRQ9NZT2 677 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 WHRNQ9P202 907 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 ANAPC5Q9UJX4 755 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 PCDHB1Q9Y5F3 818 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 TEX264Q9Y6I9 313 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 RPS6KL1Q9Y6S9 549 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 ASPMQ8IZT6 3477 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 MN1Q10571 1320 aaPredicted RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 TRBV23OR9-2A0A075B6M9 112 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 C1QTNF9BB2RNN3 333 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 GPC4O75487 556 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 VIPP01282 170 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 C1QTNF9P0C862 333 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 PGAM1P18669 254 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 ACADLP28330 430 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 ALDH4A1P30038 563 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 PBLDP30039 288 aaPredicted RBP12.87□□□□□ -0.35
SF1-216ENST00000486867 MLLT3P42568 568 aaPredicted RBP12.87□□□□□ -0.35
SF1-216ENST00000486867 LSSP48449 732 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 LIMK2P53671 638 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 DHX9Q08211 1270 aaKnown RBP12.87□□□□□ -0.35
SF1-216ENST00000486867 EIF3IQ13347 325 aaKnown RBP12.87□□□□□ -0.35
SF1-216ENST00000486867 TRA2AQ13595 282 aaKnown RBP eCLIP12.87□□□□□ -0.35
SF1-216ENST00000486867 CRYMQ14894 314 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 DNAJC21Q5F1R6 531 aaKnown RBP12.87□□□□□ -0.35
SF1-216ENST00000486867 CASC4Q6P4E1 433 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 PDZD3Q86UT5 571 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 PIM3Q86V86 326 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 IGDCC3Q8IVU1 814 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 CFAP206Q8IYR0 622 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 PDIK1LQ8N165 341 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 BBOF1Q8ND07 529 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 OR10G6Q8NH81 332 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 SEC14L1Q92503 715 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 TMEM159Q96B96 161 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 CXorf40BQ96DE9 158 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 TRIM44Q96DX7 344 aaPredicted RBP12.87□□□□□ -0.35
SF1-216ENST00000486867 PRR11Q96HE9 360 aaPredicted RBP12.87□□□□□ -0.35
SF1-216ENST00000486867 NUDT22Q9BRQ3 303 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 PHACTR1Q9C0D0 580 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 TWSG1Q9GZX9 223 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 RAB33BQ9H082 229 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 WWP1Q9H0M0 922 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 EPB41L5Q9HCM4 733 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 LATS2Q9NRM7 1088 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 INTS10Q9NVR2 710 aaKnown RBP12.87□□□□□ -0.35
SF1-216ENST00000486867 GRHL1Q9NZI5 618 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 EPHA6Q9UF33 1036 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 ATXN7L1Q9ULK2 861 aaPredicted RBP12.87□□□□□ -0.35
SF1-216ENST00000486867 CDYLQ9Y232 598 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 PCDHGA8Q9Y5G5 932 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 MRFAP1Q9Y605 127 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 WDFY3Q8IZQ1 3526 aa12.87□□□□□ -0.35
SF1-216ENST00000486867 SDK2Q58EX2 2172 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 CCDC187A0A096LP49 1063 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 DUX1O43812 170 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 URI1O94763 535 aaPredicted RBP12.86□□□□□ -0.35
SF1-216ENST00000486867 SLCO2B1O94956 709 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 S1PR4O95977 384 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 C9P02748 559 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 POLBP06746 335 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 SLC35G4P0C7Q5 338 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 THRAP10827 490 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 AOAHP28039 575 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 NDUFS1P28331 727 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 PDHA2P29803 388 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 INHBCP55103 352 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 BIRC2Q13490 618 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 GPR18Q14330 331 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 GBX1Q14549 363 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 SEPT7Q16181 437 aaKnown RBP12.86□□□□□ -0.35
SF1-216ENST00000486867 HIF1AQ16665 826 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 LONRF1Q17RB8 773 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 SPANXN3Q5MJ09 141 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 TMEM71Q6P5X7 295 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 GALNT7Q86SF2 657 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 SDCCAG8Q86SQ7 713 aaPredicted RBP12.86□□□□□ -0.35
SF1-216ENST00000486867 LDB1Q86U70 411 aaPredicted RBP12.86□□□□□ -0.35
SF1-216ENST00000486867 CNTN4Q8IWV2 1026 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 TRIM48Q8IWZ4 208 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.86□□□□□ -0.355e-7■■■■■ 28.5
SF1-216ENST00000486867 SPDYE1Q8NFV5 336 aaPredicted RBP12.86□□□□□ -0.35
SF1-216ENST00000486867 ATXN7L3BQ96GX2 97 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 KIR3DX1Q9H7L2 352 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 POLR1BQ9H9Y6 1135 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 PSMD13Q9UNM6 376 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 VPS9D1Q9Y2B5 631 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 HEBP2Q9Y5Z4 205 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 MAD1L1Q9Y6D9 718 aa12.86□□□□□ -0.35
SF1-216ENST00000486867 PKD1L2Q7Z442 2459 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms